Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.63■□□□□ 0.57
Trim16Q99PP9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.63■□□□□ 0.57
Trim16Q99PP9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim16Q99PP9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.63■□□□□ 0.57
Trim16Q99PP9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim16Q99PP9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Gm8493-201ENSMUST00000196881 489 ntBASIC18.62■□□□□ 0.57
Trim16Q99PP9 Gm43173-201ENSMUST00000202246 593 ntBASIC18.62■□□□□ 0.57
Trim16Q99PP9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trim16Q99PP9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.61■□□□□ 0.57
Trim16Q99PP9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim16Q99PP9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim16Q99PP9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.6■□□□□ 0.57
Trim16Q99PP9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim16Q99PP9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim16Q99PP9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim16Q99PP9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim16Q99PP9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Trim16Q99PP9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim16Q99PP9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim16Q99PP9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim16Q99PP9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim16Q99PP9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim16Q99PP9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trim16Q99PP9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.59■□□□□ 0.57
Trim16Q99PP9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
Trim16Q99PP9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.59■□□□□ 0.57
Trim16Q99PP9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Trim16Q99PP9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim16Q99PP9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim16Q99PP9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim16Q99PP9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim16Q99PP9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim16Q99PP9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim16Q99PP9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim16Q99PP9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.59■□□□□ 0.57
Trim16Q99PP9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
Trim16Q99PP9 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.58■□□□□ 0.57
Trim16Q99PP9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim16Q99PP9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim16Q99PP9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim16Q99PP9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim16Q99PP9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim16Q99PP9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim16Q99PP9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim16Q99PP9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim16Q99PP9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.57■□□□□ 0.56
Trim16Q99PP9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim16Q99PP9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim16Q99PP9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Trim16Q99PP9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim16Q99PP9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim16Q99PP9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim16Q99PP9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim16Q99PP9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms