Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC22.11■■□□□ 1.13
Pcdh15Q99PJ1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh15Q99PJ1 Gm10819-201ENSMUST00000099988 561 ntBASIC22.11■■□□□ 1.13
Pcdh15Q99PJ1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh15Q99PJ1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.11■■□□□ 1.13
Pcdh15Q99PJ1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh15Q99PJ1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Pcdh15Q99PJ1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh15Q99PJ1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.09■■□□□ 1.13
Pcdh15Q99PJ1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Pcdh15Q99PJ1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Pcdh15Q99PJ1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh15Q99PJ1 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.08■■□□□ 1.13
Pcdh15Q99PJ1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdh15Q99PJ1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC22.08■■□□□ 1.13
Pcdh15Q99PJ1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Pcdh15Q99PJ1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdh15Q99PJ1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.08■■□□□ 1.13
Pcdh15Q99PJ1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdh15Q99PJ1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdh15Q99PJ1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh15Q99PJ1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 H2-K2-201ENSMUST00000174250 1049 ntBASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 AC140264.2-202ENSMUST00000218746 817 ntBASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.06■■□□□ 1.12
Pcdh15Q99PJ1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdh15Q99PJ1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdh15Q99PJ1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdh15Q99PJ1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.05■■□□□ 1.12
Pcdh15Q99PJ1 Gm6433-201ENSMUST00000118634 875 ntBASIC22.05■■□□□ 1.12
Pcdh15Q99PJ1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdh15Q99PJ1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdh15Q99PJ1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.04■■□□□ 1.12
Pcdh15Q99PJ1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Pcdh15Q99PJ1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh15Q99PJ1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh15Q99PJ1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh15Q99PJ1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh15Q99PJ1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh15Q99PJ1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh15Q99PJ1 Gm8668-201ENSMUST00000120559 1447 ntBASIC22.03■■□□□ 1.12
Pcdh15Q99PJ1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh15Q99PJ1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh15Q99PJ1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Pcdh15Q99PJ1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Pcdh15Q99PJ1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC22.03■■□□□ 1.12
Pcdh15Q99PJ1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh15Q99PJ1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh15Q99PJ1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh15Q99PJ1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms