Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn4rQ99PI8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn4rQ99PI8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn4rQ99PI8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Rtn4rQ99PI8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn4rQ99PI8 Gm9988-201ENSMUST00000069786 435 ntBASIC16.85■□□□□ 0.29
Rtn4rQ99PI8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtn4rQ99PI8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn4rQ99PI8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn4rQ99PI8 Gm26571-201ENSMUST00000181399 666 ntBASIC16.84■□□□□ 0.29
Rtn4rQ99PI8 Gm42642-201ENSMUST00000200683 355 ntBASIC16.84■□□□□ 0.29
Rtn4rQ99PI8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn4rQ99PI8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn4rQ99PI8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn4rQ99PI8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn4rQ99PI8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn4rQ99PI8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtn4rQ99PI8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rtn4rQ99PI8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtn4rQ99PI8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtn4rQ99PI8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn4rQ99PI8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.83■□□□□ 0.28
Rtn4rQ99PI8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn4rQ99PI8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn4rQ99PI8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn4rQ99PI8 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.83■□□□□ 0.28
Rtn4rQ99PI8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn4rQ99PI8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn4rQ99PI8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtn4rQ99PI8 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.83■□□□□ 0.28
Rtn4rQ99PI8 Reep4-203ENSMUST00000226563 1444 ntBASIC16.83■□□□□ 0.28
Rtn4rQ99PI8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn4rQ99PI8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Gm10033-202ENSMUST00000211874 928 ntBASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn4rQ99PI8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Rtn4rQ99PI8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.8■□□□□ 0.28
Rtn4rQ99PI8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn4rQ99PI8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn4rQ99PI8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn4rQ99PI8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn4rQ99PI8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn4rQ99PI8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rtn4rQ99PI8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.8■□□□□ 0.28
Rtn4rQ99PI8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.79■□□□□ 0.28
Rtn4rQ99PI8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.78■□□□□ 0.28
Rtn4rQ99PI8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4rQ99PI8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rtn4rQ99PI8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4rQ99PI8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn4rQ99PI8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
Rtn4rQ99PI8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 145.5 ms