Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nkx6-1Q99MA9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nkx6-1Q99MA9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx6-1Q99MA9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx6-1Q99MA9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx6-1Q99MA9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx6-1Q99MA9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Gm715-201ENSMUST00000117865 831 ntBASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Gm7860-201ENSMUST00000121190 879 ntBASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Gm2559-201ENSMUST00000201323 363 ntBASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Nkx6-1Q99MA9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx6-1Q99MA9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nkx6-1Q99MA9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nkx6-1Q99MA9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nkx6-1Q99MA9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.93■□□□□ 0.46
Nkx6-1Q99MA9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx6-1Q99MA9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.93■□□□□ 0.46
Nkx6-1Q99MA9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.93■□□□□ 0.46
Nkx6-1Q99MA9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx6-1Q99MA9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx6-1Q99MA9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nkx6-1Q99MA9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.92■□□□□ 0.46
Nkx6-1Q99MA9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Nkx6-1Q99MA9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
Nkx6-1Q99MA9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Nkx6-1Q99MA9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.92■□□□□ 0.46
Nkx6-1Q99MA9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nkx6-1Q99MA9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Nkx6-1Q99MA9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx6-1Q99MA9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx6-1Q99MA9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-1Q99MA9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nkx6-1Q99MA9 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.91■□□□□ 0.46
Nkx6-1Q99MA9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-1Q99MA9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkx6-1Q99MA9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-1Q99MA9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nkx6-1Q99MA9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-1Q99MA9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-1Q99MA9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx6-1Q99MA9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.9■□□□□ 0.46
Nkx6-1Q99MA9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx6-1Q99MA9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Nkx6-1Q99MA9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.89■□□□□ 0.45
Nkx6-1Q99MA9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx6-1Q99MA9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nkx6-1Q99MA9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx6-1Q99MA9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Nkx6-1Q99MA9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Gm15565-201ENSMUST00000118890 427 ntBASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx6-1Q99MA9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms