Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cstf1Q99LC2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Cstf1Q99LC2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cstf1Q99LC2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cstf1Q99LC2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cstf1Q99LC2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cstf1Q99LC2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Cstf1Q99LC2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Cstf1Q99LC2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.08■□□□□ 0.64
Cstf1Q99LC2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cstf1Q99LC2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Cstf1Q99LC2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cstf1Q99LC2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cstf1Q99LC2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cstf1Q99LC2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cstf1Q99LC2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Gm12896-201ENSMUST00000118430 226 ntBASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cstf1Q99LC2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.06■□□□□ 0.64
Cstf1Q99LC2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cstf1Q99LC2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cstf1Q99LC2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cstf1Q99LC2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cstf1Q99LC2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.04■□□□□ 0.64
Cstf1Q99LC2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Cstf1Q99LC2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cstf1Q99LC2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cstf1Q99LC2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cstf1Q99LC2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cstf1Q99LC2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf1Q99LC2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf1Q99LC2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf1Q99LC2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf1Q99LC2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Cstf1Q99LC2 Gm5643-201ENSMUST00000117081 966 ntBASIC19.03■□□□□ 0.64
Cstf1Q99LC2 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.03■□□□□ 0.64
Cstf1Q99LC2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf1Q99LC2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf1Q99LC2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cstf1Q99LC2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cstf1Q99LC2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf1Q99LC2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf1Q99LC2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf1Q99LC2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.02■□□□□ 0.64
Cstf1Q99LC2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf1Q99LC2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf1Q99LC2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf1Q99LC2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cstf1Q99LC2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Cstf1Q99LC2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cstf1Q99LC2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cstf1Q99LC2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cstf1Q99LC2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf1Q99LC2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf1Q99LC2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf1Q99LC2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf1Q99LC2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf1Q99LC2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf1Q99LC2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.01■□□□□ 0.63
Cstf1Q99LC2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cstf1Q99LC2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cstf1Q99LC2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms