Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.45■□□□□ 0.7
Smarcd2Q99JR8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd2Q99JR8 Gm10812-201ENSMUST00000099864 546 ntBASIC19.45■□□□□ 0.7
Smarcd2Q99JR8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd2Q99JR8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd2Q99JR8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd2Q99JR8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.44■□□□□ 0.7
Smarcd2Q99JR8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smarcd2Q99JR8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd2Q99JR8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd2Q99JR8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd2Q99JR8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smarcd2Q99JR8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smarcd2Q99JR8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd2Q99JR8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd2Q99JR8 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.43■□□□□ 0.7
Smarcd2Q99JR8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd2Q99JR8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd2Q99JR8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.42■□□□□ 0.7
Smarcd2Q99JR8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd2Q99JR8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd2Q99JR8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.42■□□□□ 0.7
Smarcd2Q99JR8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd2Q99JR8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd2Q99JR8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Smarcd2Q99JR8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd2Q99JR8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd2Q99JR8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd2Q99JR8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd2Q99JR8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd2Q99JR8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd2Q99JR8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd2Q99JR8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd2Q99JR8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd2Q99JR8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smarcd2Q99JR8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcd2Q99JR8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smarcd2Q99JR8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcd2Q99JR8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcd2Q99JR8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.4■□□□□ 0.7
Smarcd2Q99JR8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.4■□□□□ 0.7
Smarcd2Q99JR8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.4■□□□□ 0.7
Smarcd2Q99JR8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smarcd2Q99JR8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.39■□□□□ 0.7
Smarcd2Q99JR8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smarcd2Q99JR8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Smarcd2Q99JR8 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.39■□□□□ 0.7
Smarcd2Q99JR8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd2Q99JR8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd2Q99JR8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcd2Q99JR8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.39■□□□□ 0.69
Smarcd2Q99JR8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd2Q99JR8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.38■□□□□ 0.69
Smarcd2Q99JR8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smarcd2Q99JR8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd2Q99JR8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd2Q99JR8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd2Q99JR8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd2Q99JR8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcd2Q99JR8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcd2Q99JR8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Smarcd2Q99JR8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd2Q99JR8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd2Q99JR8 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.36■□□□□ 0.69
Smarcd2Q99JR8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smarcd2Q99JR8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.36■□□□□ 0.69
Smarcd2Q99JR8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smarcd2Q99JR8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd2Q99JR8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcd2Q99JR8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 Gm12896-201ENSMUST00000118430 226 ntBASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 Gm27275-201ENSMUST00000184318 272 ntBASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcd2Q99JR8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms