Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk9Q99J95 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk9Q99J95 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk9Q99J95 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk9Q99J95 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk9Q99J95 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk9Q99J95 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cdk9Q99J95 Gm14117-201ENSMUST00000122417 843 ntBASIC19.19■□□□□ 0.66
Cdk9Q99J95 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk9Q99J95 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk9Q99J95 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cdk9Q99J95 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdk9Q99J95 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdk9Q99J95 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdk9Q99J95 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdk9Q99J95 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Etf1-202ENSMUST00000180351 108 ntBASIC19.15■□□□□ 0.66
Cdk9Q99J95 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdk9Q99J95 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.15■□□□□ 0.66
Cdk9Q99J95 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdk9Q99J95 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cdk9Q99J95 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdk9Q99J95 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.14■□□□□ 0.65
Cdk9Q99J95 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdk9Q99J95 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cdk9Q99J95 Gm40881-201ENSMUST00000223397 166 ntBASIC19.14■□□□□ 0.65
Cdk9Q99J95 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdk9Q99J95 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdk9Q99J95 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Cdk9Q99J95 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdk9Q99J95 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdk9Q99J95 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cdk9Q99J95 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms