Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rfc4Q99J62 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.13■■□□□ 1.13
Rfc4Q99J62 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rfc4Q99J62 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rfc4Q99J62 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.12■■□□□ 1.13
Rfc4Q99J62 Gm7860-201ENSMUST00000121190 879 ntBASIC22.12■■□□□ 1.13
Rfc4Q99J62 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Rfc4Q99J62 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.12■■□□□ 1.13
Rfc4Q99J62 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rfc4Q99J62 Rab3c-203ENSMUST00000224180 967 ntBASIC22.12■■□□□ 1.13
Rfc4Q99J62 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rfc4Q99J62 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rfc4Q99J62 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Rfc4Q99J62 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rfc4Q99J62 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rfc4Q99J62 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rfc4Q99J62 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rfc4Q99J62 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rfc4Q99J62 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rfc4Q99J62 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Rfc4Q99J62 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.11■■□□□ 1.13
Rfc4Q99J62 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.11■■□□□ 1.13
Rfc4Q99J62 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rfc4Q99J62 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rfc4Q99J62 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rfc4Q99J62 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Rfc4Q99J62 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rfc4Q99J62 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rfc4Q99J62 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rfc4Q99J62 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rfc4Q99J62 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rfc4Q99J62 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rfc4Q99J62 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rfc4Q99J62 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.08■■□□□ 1.13
Rfc4Q99J62 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.08■■□□□ 1.13
Rfc4Q99J62 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rfc4Q99J62 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
Rfc4Q99J62 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Rfc4Q99J62 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rfc4Q99J62 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Rfc4Q99J62 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Rfc4Q99J62 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Rfc4Q99J62 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Rfc4Q99J62 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rfc4Q99J62 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rfc4Q99J62 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rfc4Q99J62 Gm37563-201ENSMUST00000192580 1513 ntBASIC22.07■■□□□ 1.12
Rfc4Q99J62 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rfc4Q99J62 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rfc4Q99J62 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
Rfc4Q99J62 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rfc4Q99J62 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rfc4Q99J62 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.05■■□□□ 1.12
Rfc4Q99J62 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rfc4Q99J62 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.05■■□□□ 1.12
Rfc4Q99J62 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Rfc4Q99J62 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Rfc4Q99J62 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.05■■□□□ 1.12
Rfc4Q99J62 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.05■■□□□ 1.12
Rfc4Q99J62 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rfc4Q99J62 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rfc4Q99J62 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rfc4Q99J62 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.04■■□□□ 1.12
Rfc4Q99J62 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rfc4Q99J62 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms