Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Thumpd1Q99J36 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Thumpd1Q99J36 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Thumpd1Q99J36 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd1Q99J36 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd1Q99J36 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Thumpd1Q99J36 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd1Q99J36 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd1Q99J36 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Thumpd1Q99J36 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.02■□□□□ 0.31
Thumpd1Q99J36 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Thumpd1Q99J36 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Thumpd1Q99J36 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Thumpd1Q99J36 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd1Q99J36 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.01■□□□□ 0.31
Thumpd1Q99J36 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd1Q99J36 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd1Q99J36 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd1Q99J36 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Thumpd1Q99J36 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd1Q99J36 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd1Q99J36 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd1Q99J36 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Thumpd1Q99J36 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17■□□□□ 0.31
Thumpd1Q99J36 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17■□□□□ 0.31
Thumpd1Q99J36 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd1Q99J36 Gm43759-201ENSMUST00000196925 1261 ntBASIC17■□□□□ 0.31
Thumpd1Q99J36 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd1Q99J36 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17■□□□□ 0.31
Thumpd1Q99J36 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17■□□□□ 0.31
Thumpd1Q99J36 Gm5540-201ENSMUST00000131852 1848 ntBASIC17■□□□□ 0.31
Thumpd1Q99J36 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17■□□□□ 0.31
Thumpd1Q99J36 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd1Q99J36 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd1Q99J36 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd1Q99J36 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Gm7417-201ENSMUST00000192950 473 ntBASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd1Q99J36 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd1Q99J36 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd1Q99J36 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms