Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.85■□□□□ 0.29
Chmp1aQ921W0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chmp1aQ921W0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1aQ921W0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1aQ921W0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1aQ921W0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1aQ921W0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1aQ921W0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1aQ921W0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Chmp1aQ921W0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Chmp1aQ921W0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1aQ921W0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1aQ921W0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chmp1aQ921W0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chmp1aQ921W0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chmp1aQ921W0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1aQ921W0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chmp1aQ921W0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1aQ921W0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Chmp1aQ921W0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp1aQ921W0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp1aQ921W0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chmp1aQ921W0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1aQ921W0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1aQ921W0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1aQ921W0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1aQ921W0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1aQ921W0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1aQ921W0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.82■□□□□ 0.28
Chmp1aQ921W0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1aQ921W0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1aQ921W0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Chmp1aQ921W0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1aQ921W0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp1aQ921W0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 AA386476-201ENSMUST00000098781 1665 ntBASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp1aQ921W0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1aQ921W0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Gm9870-201ENSMUST00000063874 645 ntBASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1aQ921W0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp1aQ921W0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Cap2-205ENSMUST00000225824 1634 ntBASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Etf1-202ENSMUST00000180351 108 ntBASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms