Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Smc1bQ920F6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Smc1bQ920F6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smc1bQ920F6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smc1bQ920F6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.97■■□□□ 1.11
Smc1bQ920F6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Smc1bQ920F6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smc1bQ920F6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Smc1bQ920F6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Smc1bQ920F6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.96■■□□□ 1.11
Smc1bQ920F6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Smc1bQ920F6 Mir7071-201ENSMUST00000184847 69 ntBASIC21.96■■□□□ 1.11
Smc1bQ920F6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc1bQ920F6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc1bQ920F6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc1bQ920F6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Smc1bQ920F6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc1bQ920F6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc1bQ920F6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc1bQ920F6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smc1bQ920F6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc1bQ920F6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Smc1bQ920F6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
Smc1bQ920F6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Smc1bQ920F6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Smc1bQ920F6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smc1bQ920F6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Smc1bQ920F6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.95■■□□□ 1.1
Smc1bQ920F6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc1bQ920F6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Smc1bQ920F6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.94■■□□□ 1.1
Smc1bQ920F6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc1bQ920F6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smc1bQ920F6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc1bQ920F6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc1bQ920F6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Smc1bQ920F6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc1bQ920F6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc1bQ920F6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Smc1bQ920F6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.93■■□□□ 1.1
Smc1bQ920F6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smc1bQ920F6 Mir6236-201ENSMUST00000184437 123 ntBASIC21.93■■□□□ 1.1
Smc1bQ920F6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smc1bQ920F6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc1bQ920F6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc1bQ920F6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Smc1bQ920F6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc1bQ920F6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc1bQ920F6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smc1bQ920F6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc1bQ920F6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc1bQ920F6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc1bQ920F6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smc1bQ920F6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.92■■□□□ 1.1
Smc1bQ920F6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Smc1bQ920F6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc1bQ920F6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc1bQ920F6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smc1bQ920F6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc1bQ920F6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Smc1bQ920F6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc1bQ920F6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Smc1bQ920F6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.91■■□□□ 1.1
Smc1bQ920F6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Smc1bQ920F6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Smc1bQ920F6 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.91■■□□□ 1.1
Smc1bQ920F6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc1bQ920F6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc1bQ920F6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Smc1bQ920F6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
Smc1bQ920F6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Smc1bQ920F6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Smc1bQ920F6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc1bQ920F6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc1bQ920F6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.89■■□□□ 1.09
Smc1bQ920F6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc1bQ920F6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Gm13168-201ENSMUST00000121771 632 ntBASIC21.88■■□□□ 1.09
Smc1bQ920F6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc1bQ920F6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms