Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha11Q91Y19 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Pcdha11Q91Y19 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcdha11Q91Y19 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha11Q91Y19 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha11Q91Y19 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha11Q91Y19 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdha11Q91Y19 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pcdha11Q91Y19 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha11Q91Y19 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdha11Q91Y19 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdha11Q91Y19 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha11Q91Y19 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha11Q91Y19 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha11Q91Y19 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha11Q91Y19 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha11Q91Y19 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdha11Q91Y19 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdha11Q91Y19 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha11Q91Y19 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.1■□□□□ 0.81
Pcdha11Q91Y19 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdha11Q91Y19 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha11Q91Y19 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha11Q91Y19 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha11Q91Y19 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.09■□□□□ 0.81
Pcdha11Q91Y19 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.09■□□□□ 0.81
Pcdha11Q91Y19 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.09■□□□□ 0.81
Pcdha11Q91Y19 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdha11Q91Y19 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha11Q91Y19 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha11Q91Y19 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha11Q91Y19 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha11Q91Y19 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdha11Q91Y19 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Pcdha11Q91Y19 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdha11Q91Y19 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.08■□□□□ 0.81
Pcdha11Q91Y19 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Pcdha11Q91Y19 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.08■□□□□ 0.81
Pcdha11Q91Y19 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdha11Q91Y19 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdha11Q91Y19 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdha11Q91Y19 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdha11Q91Y19 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdha11Q91Y19 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Gm7514-201ENSMUST00000209475 934 ntBASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha11Q91Y19 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdha11Q91Y19 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdha11Q91Y19 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha11Q91Y19 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha11Q91Y19 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdha11Q91Y19 Gm13146-201ENSMUST00000118508 780 ntBASIC20.06■□□□□ 0.8
Pcdha11Q91Y19 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdha11Q91Y19 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha11Q91Y19 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha11Q91Y19 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha11Q91Y19 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha11Q91Y19 Gm37179-201ENSMUST00000194862 823 ntBASIC20.03■□□□□ 0.8
Pcdha11Q91Y19 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha11Q91Y19 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha11Q91Y19 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha11Q91Y19 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha11Q91Y19 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms