Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb20Q91XZ9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb20Q91XZ9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb20Q91XZ9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhb20Q91XZ9 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb20Q91XZ9 Gm13146-201ENSMUST00000118508 780 ntBASIC18.34■□□□□ 0.53
Pcdhb20Q91XZ9 Gm7860-201ENSMUST00000121190 879 ntBASIC18.34■□□□□ 0.53
Pcdhb20Q91XZ9 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb20Q91XZ9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb20Q91XZ9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb20Q91XZ9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb20Q91XZ9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb20Q91XZ9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb20Q91XZ9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb20Q91XZ9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb20Q91XZ9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb20Q91XZ9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb20Q91XZ9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdhb20Q91XZ9 Gm7514-201ENSMUST00000209475 934 ntBASIC18.33■□□□□ 0.52
Pcdhb20Q91XZ9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb20Q91XZ9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcdhb20Q91XZ9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb20Q91XZ9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb20Q91XZ9 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.32■□□□□ 0.52
Pcdhb20Q91XZ9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb20Q91XZ9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdhb20Q91XZ9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb20Q91XZ9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb20Q91XZ9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb20Q91XZ9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb20Q91XZ9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb20Q91XZ9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdhb20Q91XZ9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb20Q91XZ9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb20Q91XZ9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhb20Q91XZ9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb20Q91XZ9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhb20Q91XZ9 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.31■□□□□ 0.52
Pcdhb20Q91XZ9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb20Q91XZ9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb20Q91XZ9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb20Q91XZ9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb20Q91XZ9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb20Q91XZ9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Gm37179-201ENSMUST00000194862 823 ntBASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb20Q91XZ9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb20Q91XZ9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb20Q91XZ9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms