Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb22Q91XZ8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhb22Q91XZ8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhb22Q91XZ8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhb22Q91XZ8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Pcdhb22Q91XZ8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb22Q91XZ8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.39■■□□□ 1.17
Pcdhb22Q91XZ8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.39■■□□□ 1.17
Pcdhb22Q91XZ8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
Pcdhb22Q91XZ8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb22Q91XZ8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb22Q91XZ8 Reep4-203ENSMUST00000226563 1444 ntBASIC22.39■■□□□ 1.17
Pcdhb22Q91XZ8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb22Q91XZ8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhb22Q91XZ8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb22Q91XZ8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb22Q91XZ8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
Pcdhb22Q91XZ8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb22Q91XZ8 Gm5874-201ENSMUST00000096101 508 ntBASIC22.37■■□□□ 1.17
Pcdhb22Q91XZ8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb22Q91XZ8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb22Q91XZ8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb22Q91XZ8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb22Q91XZ8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pcdhb22Q91XZ8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb22Q91XZ8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.36■■□□□ 1.17
Pcdhb22Q91XZ8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb22Q91XZ8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb22Q91XZ8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhb22Q91XZ8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
Pcdhb22Q91XZ8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhb22Q91XZ8 Gm13234-201ENSMUST00000120010 747 ntBASIC22.35■■□□□ 1.17
Pcdhb22Q91XZ8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb22Q91XZ8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb22Q91XZ8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb22Q91XZ8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcdhb22Q91XZ8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb22Q91XZ8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb22Q91XZ8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb22Q91XZ8 Gm13146-201ENSMUST00000118508 780 ntBASIC22.33■■□□□ 1.17
Pcdhb22Q91XZ8 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.33■■□□□ 1.17
Pcdhb22Q91XZ8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
Pcdhb22Q91XZ8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhb22Q91XZ8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.33■■□□□ 1.16
Pcdhb22Q91XZ8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhb22Q91XZ8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhb22Q91XZ8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.32■■□□□ 1.16
Pcdhb22Q91XZ8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb22Q91XZ8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb22Q91XZ8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb22Q91XZ8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb22Q91XZ8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb22Q91XZ8 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.32■■□□□ 1.16
Pcdhb22Q91XZ8 Gm42778-201ENSMUST00000199644 553 ntBASIC22.32■■□□□ 1.16
Pcdhb22Q91XZ8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.32■■□□□ 1.16
Pcdhb22Q91XZ8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb22Q91XZ8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb22Q91XZ8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb22Q91XZ8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb22Q91XZ8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb22Q91XZ8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb22Q91XZ8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.31■■□□□ 1.16
Pcdhb22Q91XZ8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb22Q91XZ8 Gm8495-201ENSMUST00000188740 694 ntBASIC22.3■■□□□ 1.16
Pcdhb22Q91XZ8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb22Q91XZ8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.3■■□□□ 1.16
Pcdhb22Q91XZ8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb22Q91XZ8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb22Q91XZ8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb22Q91XZ8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb22Q91XZ8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb22Q91XZ8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb22Q91XZ8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb22Q91XZ8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb22Q91XZ8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms