Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhb6Q91XZ4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb6Q91XZ4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb6Q91XZ4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb6Q91XZ4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb6Q91XZ4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb6Q91XZ4 Gm43060-201ENSMUST00000200621 289 ntBASIC19.68■□□□□ 0.74
Pcdhb6Q91XZ4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb6Q91XZ4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb6Q91XZ4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb6Q91XZ4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb6Q91XZ4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Gm7860-201ENSMUST00000121190 879 ntBASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb6Q91XZ4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb6Q91XZ4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb6Q91XZ4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdhb6Q91XZ4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb6Q91XZ4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb6Q91XZ4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb6Q91XZ4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhb6Q91XZ4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb6Q91XZ4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhb6Q91XZ4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb6Q91XZ4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhb6Q91XZ4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.63■□□□□ 0.73
Pcdhb6Q91XZ4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhb6Q91XZ4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb6Q91XZ4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb6Q91XZ4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb6Q91XZ4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.61■□□□□ 0.73
Pcdhb6Q91XZ4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms