Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb1Q91XX8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb1Q91XX8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.9■□□□□ 0.78
Pcdhgb1Q91XX8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb1Q91XX8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb1Q91XX8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb1Q91XX8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgb1Q91XX8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdhgb1Q91XX8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdhgb1Q91XX8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb1Q91XX8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb1Q91XX8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb1Q91XX8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb1Q91XX8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb1Q91XX8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb1Q91XX8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Pcdhgb1Q91XX8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgb1Q91XX8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.88■□□□□ 0.77
Pcdhgb1Q91XX8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgb1Q91XX8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcdhgb1Q91XX8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhgb1Q91XX8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgb1Q91XX8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgb1Q91XX8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdhgb1Q91XX8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb1Q91XX8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb1Q91XX8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb1Q91XX8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdhgb1Q91XX8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb1Q91XX8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdhgb1Q91XX8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb1Q91XX8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.87■□□□□ 0.77
Pcdhgb1Q91XX8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb1Q91XX8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgb1Q91XX8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgb1Q91XX8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb1Q91XX8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhgb1Q91XX8 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.85■□□□□ 0.77
Pcdhgb1Q91XX8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb1Q91XX8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb1Q91XX8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdhgb1Q91XX8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb1Q91XX8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhgb1Q91XX8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb1Q91XX8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdhgb1Q91XX8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgb1Q91XX8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb1Q91XX8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb1Q91XX8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhgb1Q91XX8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.84■□□□□ 0.77
Pcdhgb1Q91XX8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhgb1Q91XX8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb1Q91XX8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb1Q91XX8 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.83■□□□□ 0.77
Pcdhgb1Q91XX8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb1Q91XX8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhgb1Q91XX8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb1Q91XX8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb1Q91XX8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Pcdhgb1Q91XX8 Gm13146-201ENSMUST00000118508 780 ntBASIC19.83■□□□□ 0.77
Pcdhgb1Q91XX8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.83■□□□□ 0.77
Pcdhgb1Q91XX8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhgb1Q91XX8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhgb1Q91XX8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Pcdhgb1Q91XX8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.83■□□□□ 0.76
Pcdhgb1Q91XX8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhgb1Q91XX8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb1Q91XX8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb1Q91XX8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb1Q91XX8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdhgb1Q91XX8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhgb1Q91XX8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhgb1Q91XX8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb1Q91XX8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb1Q91XX8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb1Q91XX8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb1Q91XX8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb1Q91XX8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb1Q91XX8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb1Q91XX8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.81■□□□□ 0.76
Pcdhgb1Q91XX8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdhgb1Q91XX8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.81■□□□□ 0.76
Pcdhgb1Q91XX8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.81■□□□□ 0.76
Pcdhgb1Q91XX8 Gm10602-201ENSMUST00000098239 609 ntBASIC19.81■□□□□ 0.76
Pcdhgb1Q91XX8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms