Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Pcdhgc5Q91XW9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhgc5Q91XW9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgc5Q91XW9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgc5Q91XW9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgc5Q91XW9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.77■■□□□ 1.08
Pcdhgc5Q91XW9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgc5Q91XW9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgc5Q91XW9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgc5Q91XW9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgc5Q91XW9 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.77■■□□□ 1.07
Pcdhgc5Q91XW9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Gm22240-201ENSMUST00000175225 82 ntBASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhgc5Q91XW9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc5Q91XW9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc5Q91XW9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc5Q91XW9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc5Q91XW9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc5Q91XW9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.75■■□□□ 1.07
Pcdhgc5Q91XW9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pcdhgc5Q91XW9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc5Q91XW9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc5Q91XW9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdhgc5Q91XW9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc5Q91XW9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc5Q91XW9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 Gm13148-201ENSMUST00000118892 745 ntBASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgc5Q91XW9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.72■■□□□ 1.07
Pcdhgc5Q91XW9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgc5Q91XW9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgc5Q91XW9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgc5Q91XW9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.71■■□□□ 1.07
Pcdhgc5Q91XW9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Pcdhgc5Q91XW9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgc5Q91XW9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgc5Q91XW9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdhgc5Q91XW9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgc5Q91XW9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgc5Q91XW9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgc5Q91XW9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdhgc5Q91XW9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms