Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.05■■□□□ 1.12
Trex1Q91XB0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
Trex1Q91XB0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trex1Q91XB0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trex1Q91XB0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trex1Q91XB0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC22.04■■□□□ 1.12
Trex1Q91XB0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trex1Q91XB0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trex1Q91XB0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Trex1Q91XB0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
Trex1Q91XB0 Gm26524-201ENSMUST00000192339 390 ntBASIC22.03■■□□□ 1.12
Trex1Q91XB0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trex1Q91XB0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trex1Q91XB0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trex1Q91XB0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trex1Q91XB0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trex1Q91XB0 Gm37563-201ENSMUST00000192580 1513 ntBASIC22.02■■□□□ 1.12
Trex1Q91XB0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Trex1Q91XB0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trex1Q91XB0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trex1Q91XB0 Gm22240-201ENSMUST00000175225 82 ntBASIC22.02■■□□□ 1.12
Trex1Q91XB0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.02■■□□□ 1.12
Trex1Q91XB0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trex1Q91XB0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trex1Q91XB0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trex1Q91XB0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trex1Q91XB0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
Trex1Q91XB0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trex1Q91XB0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.01■■□□□ 1.11
Trex1Q91XB0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trex1Q91XB0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.01■■□□□ 1.11
Trex1Q91XB0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.01■■□□□ 1.11
Trex1Q91XB0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.01■■□□□ 1.11
Trex1Q91XB0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trex1Q91XB0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trex1Q91XB0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trex1Q91XB0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trex1Q91XB0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trex1Q91XB0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trex1Q91XB0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trex1Q91XB0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22■■□□□ 1.11
Trex1Q91XB0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trex1Q91XB0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trex1Q91XB0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC22■■□□□ 1.11
Trex1Q91XB0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trex1Q91XB0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trex1Q91XB0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.99■■□□□ 1.11
Trex1Q91XB0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trex1Q91XB0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trex1Q91XB0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
Trex1Q91XB0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
Trex1Q91XB0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.99■■□□□ 1.11
Trex1Q91XB0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trex1Q91XB0 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.99■■□□□ 1.11
Trex1Q91XB0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trex1Q91XB0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trex1Q91XB0 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.98■■□□□ 1.11
Trex1Q91XB0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trex1Q91XB0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trex1Q91XB0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.98■■□□□ 1.11
Trex1Q91XB0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.98■■□□□ 1.11
Trex1Q91XB0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trex1Q91XB0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.98■■□□□ 1.11
Trex1Q91XB0 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.98■■□□□ 1.11
Trex1Q91XB0 Gm37856-201ENSMUST00000191634 999 ntBASIC21.98■■□□□ 1.11
Trex1Q91XB0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trex1Q91XB0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trex1Q91XB0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trex1Q91XB0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trex1Q91XB0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Trex1Q91XB0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trex1Q91XB0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Trex1Q91XB0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Trex1Q91XB0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trex1Q91XB0 Gm8520-201ENSMUST00000186517 868 ntBASIC21.97■■□□□ 1.11
Trex1Q91XB0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trex1Q91XB0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trex1Q91XB0 Rab3c-203ENSMUST00000224180 967 ntBASIC21.97■■□□□ 1.11
Trex1Q91XB0 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.97■■□□□ 1.11
Trex1Q91XB0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trex1Q91XB0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trex1Q91XB0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trex1Q91XB0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trex1Q91XB0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trex1Q91XB0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.96■■□□□ 1.11
Trex1Q91XB0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trex1Q91XB0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trex1Q91XB0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Trex1Q91XB0 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms