Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb17Q91VD8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb17Q91VD8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb17Q91VD8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Gm38205-201ENSMUST00000192243 258 ntBASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb17Q91VD8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhb17Q91VD8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.77■□□□□ 0.76
Pcdhb17Q91VD8 Gm13146-201ENSMUST00000118508 780 ntBASIC19.77■□□□□ 0.76
Pcdhb17Q91VD8 Gm13234-201ENSMUST00000120010 747 ntBASIC19.77■□□□□ 0.76
Pcdhb17Q91VD8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhb17Q91VD8 Gm10033-202ENSMUST00000211874 928 ntBASIC19.77■□□□□ 0.76
Pcdhb17Q91VD8 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC19.77■□□□□ 0.76
Pcdhb17Q91VD8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb17Q91VD8 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb17Q91VD8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb17Q91VD8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb17Q91VD8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.76■□□□□ 0.75
Pcdhb17Q91VD8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 Gm21156-201ENSMUST00000189693 869 ntBASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 Golph3-202ENSMUST00000226517 2359 ntBASIC19.75■□□□□ 0.75
Pcdhb17Q91VD8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb17Q91VD8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb17Q91VD8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb17Q91VD8 Gm6754-201ENSMUST00000117124 913 ntBASIC19.74■□□□□ 0.75
Pcdhb17Q91VD8 Gm42642-201ENSMUST00000200683 355 ntBASIC19.74■□□□□ 0.75
Pcdhb17Q91VD8 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.74■□□□□ 0.75
Pcdhb17Q91VD8 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.74■□□□□ 0.75
Pcdhb17Q91VD8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.74■□□□□ 0.75
Pcdhb17Q91VD8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb17Q91VD8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb17Q91VD8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb17Q91VD8 Gm10849-201ENSMUST00000100397 618 ntBASIC19.73■□□□□ 0.75
Pcdhb17Q91VD8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb17Q91VD8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb17Q91VD8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhb17Q91VD8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb17Q91VD8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb17Q91VD8 Notumos-201ENSMUST00000151998 2659 ntBASIC19.73■□□□□ 0.75
Pcdhb17Q91VD8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb17Q91VD8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb17Q91VD8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb17Q91VD8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb17Q91VD8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb17Q91VD8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdhb17Q91VD8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhb17Q91VD8 Gm42778-201ENSMUST00000199644 553 ntBASIC19.72■□□□□ 0.75
Pcdhb17Q91VD8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.72■□□□□ 0.75
Pcdhb17Q91VD8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms