Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TraipQ8VIG6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.39■□□□□ 0.85
TraipQ8VIG6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TraipQ8VIG6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TraipQ8VIG6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TraipQ8VIG6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TraipQ8VIG6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TraipQ8VIG6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.37■□□□□ 0.85
TraipQ8VIG6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TraipQ8VIG6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TraipQ8VIG6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TraipQ8VIG6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TraipQ8VIG6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
TraipQ8VIG6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TraipQ8VIG6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TraipQ8VIG6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TraipQ8VIG6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
TraipQ8VIG6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TraipQ8VIG6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TraipQ8VIG6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.36■□□□□ 0.85
TraipQ8VIG6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TraipQ8VIG6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.36■□□□□ 0.85
TraipQ8VIG6 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.36■□□□□ 0.85
TraipQ8VIG6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TraipQ8VIG6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TraipQ8VIG6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TraipQ8VIG6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
TraipQ8VIG6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.33■□□□□ 0.85
TraipQ8VIG6 Gm26524-201ENSMUST00000192339 390 ntBASIC20.33■□□□□ 0.85
TraipQ8VIG6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TraipQ8VIG6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.33■□□□□ 0.85
TraipQ8VIG6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TraipQ8VIG6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TraipQ8VIG6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TraipQ8VIG6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TraipQ8VIG6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TraipQ8VIG6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.32■□□□□ 0.84
TraipQ8VIG6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TraipQ8VIG6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TraipQ8VIG6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TraipQ8VIG6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
TraipQ8VIG6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.32■□□□□ 0.84
TraipQ8VIG6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TraipQ8VIG6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TraipQ8VIG6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TraipQ8VIG6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms