Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab40bQ8VHP8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.2■□□□□ 0.34
Rab40bQ8VHP8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab40bQ8VHP8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rab40bQ8VHP8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab40bQ8VHP8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Rab40bQ8VHP8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rab40bQ8VHP8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab40bQ8VHP8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab40bQ8VHP8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab40bQ8VHP8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab40bQ8VHP8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Grk6-206ENSMUST00000224995 2971 ntBASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab40bQ8VHP8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.15■□□□□ 0.34
Rab40bQ8VHP8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rab40bQ8VHP8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40bQ8VHP8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40bQ8VHP8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40bQ8VHP8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rab40bQ8VHP8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Rab40bQ8VHP8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rab40bQ8VHP8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40bQ8VHP8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40bQ8VHP8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40bQ8VHP8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rab40bQ8VHP8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rab40bQ8VHP8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab40bQ8VHP8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab40bQ8VHP8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rab40bQ8VHP8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rab40bQ8VHP8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab40bQ8VHP8 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.13■□□□□ 0.33
Rab40bQ8VHP8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab40bQ8VHP8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms