Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Vps4aQ8VEJ9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps4aQ8VEJ9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.46■□□□□ 0.55
Vps4aQ8VEJ9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps4aQ8VEJ9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Gm10493-201ENSMUST00000097270 612 ntBASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps4aQ8VEJ9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps4aQ8VEJ9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps4aQ8VEJ9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Gm26833-201ENSMUST00000180899 440 ntBASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Gm43173-201ENSMUST00000202246 593 ntBASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.42■□□□□ 0.54
Vps4aQ8VEJ9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 Gm43060-201ENSMUST00000200621 289 ntBASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 Gm42642-201ENSMUST00000200683 355 ntBASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps4aQ8VEJ9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.4■□□□□ 0.54
Vps4aQ8VEJ9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Vps4aQ8VEJ9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4aQ8VEJ9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Vps4aQ8VEJ9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Vps4aQ8VEJ9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4aQ8VEJ9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4aQ8VEJ9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Vps4aQ8VEJ9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4aQ8VEJ9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4aQ8VEJ9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4aQ8VEJ9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4aQ8VEJ9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4aQ8VEJ9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms