Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nkd2Q8VE28 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkd2Q8VE28 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkd2Q8VE28 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkd2Q8VE28 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkd2Q8VE28 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkd2Q8VE28 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nkd2Q8VE28 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Nkd2Q8VE28 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkd2Q8VE28 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Gm37179-201ENSMUST00000194862 823 ntBASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkd2Q8VE28 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.37■□□□□ 0.37
Nkd2Q8VE28 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkd2Q8VE28 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nkd2Q8VE28 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.36■□□□□ 0.37
Nkd2Q8VE28 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkd2Q8VE28 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkd2Q8VE28 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkd2Q8VE28 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkd2Q8VE28 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkd2Q8VE28 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.36■□□□□ 0.37
Nkd2Q8VE28 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Nkd2Q8VE28 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkd2Q8VE28 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkd2Q8VE28 Gm11421-201ENSMUST00000122124 294 ntBASIC17.35■□□□□ 0.37
Nkd2Q8VE28 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nkd2Q8VE28 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.35■□□□□ 0.37
Nkd2Q8VE28 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkd2Q8VE28 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkd2Q8VE28 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkd2Q8VE28 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkd2Q8VE28 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.33■□□□□ 0.37
Nkd2Q8VE28 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkd2Q8VE28 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nkd2Q8VE28 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Nkd2Q8VE28 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkd2Q8VE28 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkd2Q8VE28 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkd2Q8VE28 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkd2Q8VE28 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkd2Q8VE28 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkd2Q8VE28 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nkd2Q8VE28 Gm42778-201ENSMUST00000199644 553 ntBASIC17.32■□□□□ 0.36
Nkd2Q8VE28 AV356131-201ENSMUST00000206201 750 ntBASIC17.32■□□□□ 0.36
Nkd2Q8VE28 Gm10033-202ENSMUST00000211874 928 ntBASIC17.32■□□□□ 0.36
Nkd2Q8VE28 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkd2Q8VE28 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.32■□□□□ 0.36
Nkd2Q8VE28 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nkd2Q8VE28 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkd2Q8VE28 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms