Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx39aQ8VDW0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx39aQ8VDW0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ddx39aQ8VDW0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ddx39aQ8VDW0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx39aQ8VDW0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.27■■□□□ 1
Ddx39aQ8VDW0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Ddx39aQ8VDW0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ddx39aQ8VDW0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ddx39aQ8VDW0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx39aQ8VDW0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx39aQ8VDW0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx39aQ8VDW0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx39aQ8VDW0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx39aQ8VDW0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx39aQ8VDW0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx39aQ8VDW0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ddx39aQ8VDW0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.25■□□□□ 0.99
Ddx39aQ8VDW0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.25■□□□□ 0.99
Ddx39aQ8VDW0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx39aQ8VDW0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Ddx39aQ8VDW0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx39aQ8VDW0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
Ddx39aQ8VDW0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Ddx39aQ8VDW0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx39aQ8VDW0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx39aQ8VDW0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ddx39aQ8VDW0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx39aQ8VDW0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx39aQ8VDW0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx39aQ8VDW0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx39aQ8VDW0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx39aQ8VDW0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx39aQ8VDW0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ddx39aQ8VDW0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx39aQ8VDW0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx39aQ8VDW0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.23■□□□□ 0.99
Ddx39aQ8VDW0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.23■□□□□ 0.99
Ddx39aQ8VDW0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx39aQ8VDW0 Gm13148-201ENSMUST00000118892 745 ntBASIC21.23■□□□□ 0.99
Ddx39aQ8VDW0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.23■□□□□ 0.99
Ddx39aQ8VDW0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx39aQ8VDW0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx39aQ8VDW0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx39aQ8VDW0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Ddx39aQ8VDW0 Gm12441-201ENSMUST00000121806 588 ntBASIC21.21■□□□□ 0.99
Ddx39aQ8VDW0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Ddx39aQ8VDW0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.21■□□□□ 0.99
Ddx39aQ8VDW0 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.21■□□□□ 0.99
Ddx39aQ8VDW0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx39aQ8VDW0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx39aQ8VDW0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ddx39aQ8VDW0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx39aQ8VDW0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx39aQ8VDW0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx39aQ8VDW0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx39aQ8VDW0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx39aQ8VDW0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx39aQ8VDW0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ddx39aQ8VDW0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx39aQ8VDW0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ddx39aQ8VDW0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx39aQ8VDW0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ddx39aQ8VDW0 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.19■□□□□ 0.98
Ddx39aQ8VDW0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ddx39aQ8VDW0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.19■□□□□ 0.98
Ddx39aQ8VDW0 Gm5408-201ENSMUST00000197998 747 ntBASIC21.19■□□□□ 0.98
Ddx39aQ8VDW0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx39aQ8VDW0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx39aQ8VDW0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx39aQ8VDW0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx39aQ8VDW0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx39aQ8VDW0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.18■□□□□ 0.98
Ddx39aQ8VDW0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms