Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3kbp1Q8R550 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3kbp1Q8R550 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.69■□□□□ 0.74
Sh3kbp1Q8R550 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3kbp1Q8R550 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Sh3kbp1Q8R550 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3kbp1Q8R550 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.68■□□□□ 0.74
Sh3kbp1Q8R550 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh3kbp1Q8R550 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.68■□□□□ 0.74
Sh3kbp1Q8R550 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh3kbp1Q8R550 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.68■□□□□ 0.74
Sh3kbp1Q8R550 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh3kbp1Q8R550 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh3kbp1Q8R550 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh3kbp1Q8R550 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.68■□□□□ 0.74
Sh3kbp1Q8R550 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3kbp1Q8R550 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Sh3kbp1Q8R550 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.67■□□□□ 0.74
Sh3kbp1Q8R550 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3kbp1Q8R550 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3kbp1Q8R550 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3kbp1Q8R550 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.67■□□□□ 0.74
Sh3kbp1Q8R550 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3kbp1Q8R550 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sh3kbp1Q8R550 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3kbp1Q8R550 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.67■□□□□ 0.74
Sh3kbp1Q8R550 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 Reep4-203ENSMUST00000226563 1444 ntBASIC19.66■□□□□ 0.74
Sh3kbp1Q8R550 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3kbp1Q8R550 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.65■□□□□ 0.74
Sh3kbp1Q8R550 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Sh3kbp1Q8R550 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3kbp1Q8R550 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3kbp1Q8R550 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sh3kbp1Q8R550 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sh3kbp1Q8R550 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3kbp1Q8R550 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3kbp1Q8R550 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sh3kbp1Q8R550 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sh3kbp1Q8R550 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sh3kbp1Q8R550 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.64■□□□□ 0.74
Sh3kbp1Q8R550 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sh3kbp1Q8R550 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3kbp1Q8R550 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Gm13234-201ENSMUST00000120010 747 ntBASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Gm27801-201ENSMUST00000184174 223 ntBASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3kbp1Q8R550 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3kbp1Q8R550 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3kbp1Q8R550 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3kbp1Q8R550 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3kbp1Q8R550 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.62■□□□□ 0.73
Sh3kbp1Q8R550 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.62■□□□□ 0.73
Sh3kbp1Q8R550 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3kbp1Q8R550 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3kbp1Q8R550 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.62■□□□□ 0.73
Sh3kbp1Q8R550 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3kbp1Q8R550 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.61■□□□□ 0.73
Sh3kbp1Q8R550 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3kbp1Q8R550 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.61■□□□□ 0.73
Sh3kbp1Q8R550 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms