Protein–RNA interactions for Protein: Q8R4F0

Mcoln3, Mucolipin-3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mcoln3Q8R4F0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mcoln3Q8R4F0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Mcoln3Q8R4F0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mcoln3Q8R4F0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mcoln3Q8R4F0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.5■□□□□ 0.55
Mcoln3Q8R4F0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mcoln3Q8R4F0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mcoln3Q8R4F0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mcoln3Q8R4F0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Mcoln3Q8R4F0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mcoln3Q8R4F0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.5■□□□□ 0.55
Mcoln3Q8R4F0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Gm12251-201ENSMUST00000117893 792 ntBASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Mcoln3Q8R4F0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.48■□□□□ 0.55
Mcoln3Q8R4F0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mcoln3Q8R4F0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mcoln3Q8R4F0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mcoln3Q8R4F0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Mcoln3Q8R4F0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mcoln3Q8R4F0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.47■□□□□ 0.55
Mcoln3Q8R4F0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Mcoln3Q8R4F0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Mcoln3Q8R4F0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Mcoln3Q8R4F0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mcoln3Q8R4F0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mcoln3Q8R4F0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.46■□□□□ 0.55
Mcoln3Q8R4F0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
Mcoln3Q8R4F0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mcoln3Q8R4F0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mcoln3Q8R4F0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mcoln3Q8R4F0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.46■□□□□ 0.55
Mcoln3Q8R4F0 Gm43173-201ENSMUST00000202246 593 ntBASIC18.46■□□□□ 0.55
Mcoln3Q8R4F0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mcoln3Q8R4F0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mcoln3Q8R4F0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.46■□□□□ 0.54
Mcoln3Q8R4F0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mcoln3Q8R4F0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mcoln3Q8R4F0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Mcoln3Q8R4F0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mcoln3Q8R4F0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Mcoln3Q8R4F0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mcoln3Q8R4F0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mcoln3Q8R4F0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mcoln3Q8R4F0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Mcoln3Q8R4F0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mcoln3Q8R4F0 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.44■□□□□ 0.54
Mcoln3Q8R4F0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.44■□□□□ 0.54
Mcoln3Q8R4F0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mcoln3Q8R4F0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Mcoln3Q8R4F0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Mcoln3Q8R4F0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mcoln3Q8R4F0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mcoln3Q8R4F0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mcoln3Q8R4F0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Gm43017-201ENSMUST00000198296 752 ntBASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mcoln3Q8R4F0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms