Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Atp2a1Q8R429 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Atp2a1Q8R429 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Atp2a1Q8R429 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Atp2a1Q8R429 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Atp2a1Q8R429 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Atp2a1Q8R429 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Atp2a1Q8R429 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Atp2a1Q8R429 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Atp2a1Q8R429 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Atp2a1Q8R429 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atp2a1Q8R429 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atp2a1Q8R429 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.39■■□□□ 1.01
Atp2a1Q8R429 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atp2a1Q8R429 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atp2a1Q8R429 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Atp2a1Q8R429 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Atp2a1Q8R429 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Atp2a1Q8R429 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.38■■□□□ 1.01
Atp2a1Q8R429 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.38■■□□□ 1.01
Atp2a1Q8R429 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Atp2a1Q8R429 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.38■■□□□ 1.01
Atp2a1Q8R429 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.38■■□□□ 1.01
Atp2a1Q8R429 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Atp2a1Q8R429 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Atp2a1Q8R429 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Atp2a1Q8R429 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Atp2a1Q8R429 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.37■■□□□ 1.01
Atp2a1Q8R429 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Atp2a1Q8R429 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Gm7290-201ENSMUST00000104990 617 ntBASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Gm12918-201ENSMUST00000120234 636 ntBASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Gm15710-201ENSMUST00000121821 636 ntBASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Gm5075-201ENSMUST00000196916 622 ntBASIC21.36■■□□□ 1.01
Atp2a1Q8R429 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Atp2a1Q8R429 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atp2a1Q8R429 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Atp2a1Q8R429 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Atp2a1Q8R429 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Atp2a1Q8R429 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atp2a1Q8R429 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Atp2a1Q8R429 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atp2a1Q8R429 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atp2a1Q8R429 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Atp2a1Q8R429 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atp2a1Q8R429 Gm12441-201ENSMUST00000121806 588 ntBASIC21.34■■□□□ 1.01
Atp2a1Q8R429 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Atp2a1Q8R429 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atp2a1Q8R429 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Atp2a1Q8R429 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atp2a1Q8R429 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atp2a1Q8R429 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.33■■□□□ 1.01
Atp2a1Q8R429 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Atp2a1Q8R429 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.33■■□□□ 1.01
Atp2a1Q8R429 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Atp2a1Q8R429 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Atp2a1Q8R429 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Atp2a1Q8R429 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.32■■□□□ 1
Atp2a1Q8R429 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.32■■□□□ 1
Atp2a1Q8R429 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atp2a1Q8R429 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atp2a1Q8R429 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atp2a1Q8R429 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.32■■□□□ 1
Atp2a1Q8R429 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Atp2a1Q8R429 Gm6420-201ENSMUST00000193885 723 ntBASIC21.32■■□□□ 1
Atp2a1Q8R429 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atp2a1Q8R429 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Atp2a1Q8R429 Gm4968-201ENSMUST00000071458 858 ntBASIC21.32■■□□□ 1
Atp2a1Q8R429 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Atp2a1Q8R429 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.32■■□□□ 1
Atp2a1Q8R429 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.32■■□□□ 1
Atp2a1Q8R429 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms