Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cacnb1Q8R3Z5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cacnb1Q8R3Z5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cacnb1Q8R3Z5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Cacnb1Q8R3Z5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cacnb1Q8R3Z5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.31■■□□□ 1
Cacnb1Q8R3Z5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cacnb1Q8R3Z5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.31■■□□□ 1
Cacnb1Q8R3Z5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cacnb1Q8R3Z5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cacnb1Q8R3Z5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cacnb1Q8R3Z5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cacnb1Q8R3Z5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cacnb1Q8R3Z5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.3■■□□□ 1
Cacnb1Q8R3Z5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cacnb1Q8R3Z5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cacnb1Q8R3Z5 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cacnb1Q8R3Z5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cacnb1Q8R3Z5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cacnb1Q8R3Z5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cacnb1Q8R3Z5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Cacnb1Q8R3Z5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cacnb1Q8R3Z5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cacnb1Q8R3Z5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
Cacnb1Q8R3Z5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cacnb1Q8R3Z5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cacnb1Q8R3Z5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cacnb1Q8R3Z5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cacnb1Q8R3Z5 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Gm44645-201ENSMUST00000205492 1653 ntBASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Iqck-206ENSMUST00000208658 2891 ntBASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cacnb1Q8R3Z5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.27■■□□□ 1
Cacnb1Q8R3Z5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cacnb1Q8R3Z5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cacnb1Q8R3Z5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cacnb1Q8R3Z5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.27■■□□□ 1
Cacnb1Q8R3Z5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Cacnb1Q8R3Z5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cacnb1Q8R3Z5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cacnb1Q8R3Z5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cacnb1Q8R3Z5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cacnb1Q8R3Z5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cacnb1Q8R3Z5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Cacnb1Q8R3Z5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Cacnb1Q8R3Z5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacnb1Q8R3Z5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cacnb1Q8R3Z5 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Cacnb1Q8R3Z5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cacnb1Q8R3Z5 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cacnb1Q8R3Z5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacnb1Q8R3Z5 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC21.26■□□□□ 0.99
Cacnb1Q8R3Z5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Cacnb1Q8R3Z5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacnb1Q8R3Z5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacnb1Q8R3Z5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacnb1Q8R3Z5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacnb1Q8R3Z5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacnb1Q8R3Z5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacnb1Q8R3Z5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacnb1Q8R3Z5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacnb1Q8R3Z5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.25■□□□□ 0.99
Cacnb1Q8R3Z5 Gm22923-201ENSMUST00000174952 110 ntBASIC21.25■□□□□ 0.99
Cacnb1Q8R3Z5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cacnb1Q8R3Z5 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.24■□□□□ 0.99
Cacnb1Q8R3Z5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacnb1Q8R3Z5 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cacnb1Q8R3Z5 Gm15039-201ENSMUST00000118914 875 ntBASIC21.24■□□□□ 0.99
Cacnb1Q8R3Z5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.24■□□□□ 0.99
Cacnb1Q8R3Z5 Gm27801-201ENSMUST00000184174 223 ntBASIC21.24■□□□□ 0.99
Cacnb1Q8R3Z5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacnb1Q8R3Z5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cacnb1Q8R3Z5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacnb1Q8R3Z5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cacnb1Q8R3Z5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cacnb1Q8R3Z5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms