Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubqln1Q8R317 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubqln1Q8R317 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubqln1Q8R317 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.08■□□□□ 0.48
Ubqln1Q8R317 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubqln1Q8R317 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ubqln1Q8R317 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ubqln1Q8R317 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubqln1Q8R317 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubqln1Q8R317 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubqln1Q8R317 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubqln1Q8R317 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Ubqln1Q8R317 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.07■□□□□ 0.48
Ubqln1Q8R317 Gm40848-201ENSMUST00000221998 324 ntBASIC18.07■□□□□ 0.48
Ubqln1Q8R317 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubqln1Q8R317 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.07■□□□□ 0.48
Ubqln1Q8R317 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubqln1Q8R317 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubqln1Q8R317 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubqln1Q8R317 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubqln1Q8R317 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.06■□□□□ 0.48
Ubqln1Q8R317 Gm43060-201ENSMUST00000200621 289 ntBASIC18.06■□□□□ 0.48
Ubqln1Q8R317 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubqln1Q8R317 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubqln1Q8R317 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubqln1Q8R317 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubqln1Q8R317 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubqln1Q8R317 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubqln1Q8R317 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubqln1Q8R317 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubqln1Q8R317 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.03■□□□□ 0.48
Ubqln1Q8R317 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ubqln1Q8R317 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ubqln1Q8R317 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ubqln1Q8R317 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.03■□□□□ 0.48
Ubqln1Q8R317 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubqln1Q8R317 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ubqln1Q8R317 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubqln1Q8R317 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubqln1Q8R317 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubqln1Q8R317 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubqln1Q8R317 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubqln1Q8R317 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ubqln1Q8R317 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.02■□□□□ 0.48
Ubqln1Q8R317 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubqln1Q8R317 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubqln1Q8R317 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ubqln1Q8R317 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubqln1Q8R317 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ubqln1Q8R317 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ubqln1Q8R317 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ubqln1Q8R317 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.02■□□□□ 0.47
Ubqln1Q8R317 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Ubqln1Q8R317 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ubqln1Q8R317 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubqln1Q8R317 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ubqln1Q8R317 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubqln1Q8R317 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Ubqln1Q8R317 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ubqln1Q8R317 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ubqln1Q8R317 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubqln1Q8R317 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubqln1Q8R317 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ubqln1Q8R317 Gm32699-201ENSMUST00000221728 1988 ntBASIC18■□□□□ 0.47
Ubqln1Q8R317 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Ubqln1Q8R317 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ubqln1Q8R317 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ubqln1Q8R317 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ubqln1Q8R317 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ubqln1Q8R317 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Ubqln1Q8R317 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18■□□□□ 0.47
Ubqln1Q8R317 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ubqln1Q8R317 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ubqln1Q8R317 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18■□□□□ 0.47
Ubqln1Q8R317 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms