Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Zcchc9Q8R1J3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.04■□□□□ 0.64
Zcchc9Q8R1J3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Zcchc9Q8R1J3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Zcchc9Q8R1J3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Zcchc9Q8R1J3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Zcchc9Q8R1J3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Zcchc9Q8R1J3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Zcchc9Q8R1J3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.03■□□□□ 0.64
Zcchc9Q8R1J3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Zcchc9Q8R1J3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Zcchc9Q8R1J3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Zcchc9Q8R1J3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Zcchc9Q8R1J3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Zcchc9Q8R1J3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Zcchc9Q8R1J3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Zcchc9Q8R1J3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Zcchc9Q8R1J3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Zcchc9Q8R1J3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Zcchc9Q8R1J3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Zcchc9Q8R1J3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Zcchc9Q8R1J3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Zcchc9Q8R1J3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Zcchc9Q8R1J3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Zcchc9Q8R1J3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Zcchc9Q8R1J3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Zcchc9Q8R1J3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.02■□□□□ 0.64
Zcchc9Q8R1J3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Zcchc9Q8R1J3 Gm10653-202ENSMUST00000139570 835 ntBASIC19.02■□□□□ 0.64
Zcchc9Q8R1J3 Nespas-201ENSMUST00000143738 1083 ntBASIC19.02■□□□□ 0.64
Zcchc9Q8R1J3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Zcchc9Q8R1J3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.02■□□□□ 0.63
Zcchc9Q8R1J3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Zcchc9Q8R1J3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.01■□□□□ 0.63
Zcchc9Q8R1J3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.01■□□□□ 0.63
Zcchc9Q8R1J3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Zcchc9Q8R1J3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Zcchc9Q8R1J3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Zcchc9Q8R1J3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Zcchc9Q8R1J3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Zcchc9Q8R1J3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Zcchc9Q8R1J3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Zcchc9Q8R1J3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Zcchc9Q8R1J3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zcchc9Q8R1J3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Zcchc9Q8R1J3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Zcchc9Q8R1J3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.98■□□□□ 0.63
Zcchc9Q8R1J3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Zcchc9Q8R1J3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Zcchc9Q8R1J3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Zcchc9Q8R1J3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Zcchc9Q8R1J3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Zcchc9Q8R1J3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.97■□□□□ 0.63
Zcchc9Q8R1J3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Zcchc9Q8R1J3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Zcchc9Q8R1J3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Zcchc9Q8R1J3 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.97■□□□□ 0.63
Zcchc9Q8R1J3 Gm4968-201ENSMUST00000071458 858 ntBASIC18.97■□□□□ 0.63
Zcchc9Q8R1J3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Zcchc9Q8R1J3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Zcchc9Q8R1J3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.97■□□□□ 0.63
Zcchc9Q8R1J3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.96■□□□□ 0.63
Zcchc9Q8R1J3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms