Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm45640-201ENSMUST00000210665 1896 ntBASIC23.4■■□□□ 1.34
Sf3a1Q8K4Z5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Sf3a1Q8K4Z5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Sf3a1Q8K4Z5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Sf3a1Q8K4Z5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Sf3a1Q8K4Z5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC23.39■■□□□ 1.33
Sf3a1Q8K4Z5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
Sf3a1Q8K4Z5 Gm9988-201ENSMUST00000069786 435 ntBASIC23.39■■□□□ 1.33
Sf3a1Q8K4Z5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sf3a1Q8K4Z5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Sf3a1Q8K4Z5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sf3a1Q8K4Z5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Sf3a1Q8K4Z5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23.38■■□□□ 1.33
Sf3a1Q8K4Z5 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.38■■□□□ 1.33
Sf3a1Q8K4Z5 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.38■■□□□ 1.33
Sf3a1Q8K4Z5 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.38■■□□□ 1.33
Sf3a1Q8K4Z5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sf3a1Q8K4Z5 Gm5874-201ENSMUST00000096101 508 ntBASIC23.38■■□□□ 1.33
Sf3a1Q8K4Z5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sf3a1Q8K4Z5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sf3a1Q8K4Z5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sf3a1Q8K4Z5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sf3a1Q8K4Z5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sf3a1Q8K4Z5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Sf3a1Q8K4Z5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.36■■□□□ 1.33
Sf3a1Q8K4Z5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sf3a1Q8K4Z5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Sf3a1Q8K4Z5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Sf3a1Q8K4Z5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sf3a1Q8K4Z5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Sf3a1Q8K4Z5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sf3a1Q8K4Z5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Sf3a1Q8K4Z5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Sf3a1Q8K4Z5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Sf3a1Q8K4Z5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Sf3a1Q8K4Z5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sf3a1Q8K4Z5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Sf3a1Q8K4Z5 Gm8495-201ENSMUST00000188740 694 ntBASIC23.34■■□□□ 1.33
Sf3a1Q8K4Z5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sf3a1Q8K4Z5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sf3a1Q8K4Z5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
Sf3a1Q8K4Z5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sf3a1Q8K4Z5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sf3a1Q8K4Z5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sf3a1Q8K4Z5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sf3a1Q8K4Z5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sf3a1Q8K4Z5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
Sf3a1Q8K4Z5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sf3a1Q8K4Z5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Sf3a1Q8K4Z5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Sf3a1Q8K4Z5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
Sf3a1Q8K4Z5 Reep4-203ENSMUST00000226563 1444 ntBASIC23.33■■□□□ 1.32
Sf3a1Q8K4Z5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Gm7860-201ENSMUST00000121190 879 ntBASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.32■■□□□ 1.32
Sf3a1Q8K4Z5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sf3a1Q8K4Z5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sf3a1Q8K4Z5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sf3a1Q8K4Z5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sf3a1Q8K4Z5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sf3a1Q8K4Z5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sf3a1Q8K4Z5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Sf3a1Q8K4Z5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sf3a1Q8K4Z5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sf3a1Q8K4Z5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sf3a1Q8K4Z5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.3■■□□□ 1.32
Sf3a1Q8K4Z5 Gm38205-201ENSMUST00000192243 258 ntBASIC23.3■■□□□ 1.32
Sf3a1Q8K4Z5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sf3a1Q8K4Z5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Sf3a1Q8K4Z5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sf3a1Q8K4Z5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC23.3■■□□□ 1.32
Sf3a1Q8K4Z5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sf3a1Q8K4Z5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Sf3a1Q8K4Z5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sf3a1Q8K4Z5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.29■■□□□ 1.32
Sf3a1Q8K4Z5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms