Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Gm12251-201ENSMUST00000117893 792 ntBASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcs1Q8JZK9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Hmgcs1Q8JZK9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgcs1Q8JZK9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgcs1Q8JZK9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgcs1Q8JZK9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgcs1Q8JZK9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
Hmgcs1Q8JZK9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Hmgcs1Q8JZK9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hmgcs1Q8JZK9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcs1Q8JZK9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcs1Q8JZK9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcs1Q8JZK9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgcs1Q8JZK9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Hmgcs1Q8JZK9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcs1Q8JZK9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcs1Q8JZK9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcs1Q8JZK9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.15■□□□□ 0.5
Hmgcs1Q8JZK9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcs1Q8JZK9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms