Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfwd3Q8CIK8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rfwd3Q8CIK8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfwd3Q8CIK8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.97■□□□□ 0.47
Rfwd3Q8CIK8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfwd3Q8CIK8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfwd3Q8CIK8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfwd3Q8CIK8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfwd3Q8CIK8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfwd3Q8CIK8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rfwd3Q8CIK8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfwd3Q8CIK8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfwd3Q8CIK8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfwd3Q8CIK8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Rfwd3Q8CIK8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfwd3Q8CIK8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rfwd3Q8CIK8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfwd3Q8CIK8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfwd3Q8CIK8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.95■□□□□ 0.46
Rfwd3Q8CIK8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfwd3Q8CIK8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Rfwd3Q8CIK8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.95■□□□□ 0.46
Rfwd3Q8CIK8 Gm27801-201ENSMUST00000184174 223 ntBASIC17.95■□□□□ 0.46
Rfwd3Q8CIK8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.95■□□□□ 0.46
Rfwd3Q8CIK8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rfwd3Q8CIK8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfwd3Q8CIK8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfwd3Q8CIK8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfwd3Q8CIK8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Rfwd3Q8CIK8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfwd3Q8CIK8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfwd3Q8CIK8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfwd3Q8CIK8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfwd3Q8CIK8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfwd3Q8CIK8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rfwd3Q8CIK8 Golph3-202ENSMUST00000226517 2359 ntBASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfwd3Q8CIK8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfwd3Q8CIK8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rfwd3Q8CIK8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfwd3Q8CIK8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.89■□□□□ 0.45
Rfwd3Q8CIK8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.89■□□□□ 0.45
Rfwd3Q8CIK8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rfwd3Q8CIK8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms