Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Depdc1aQ8CIG0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Depdc1aQ8CIG0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Depdc1aQ8CIG0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.66■■□□□ 1.06
Depdc1aQ8CIG0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Depdc1aQ8CIG0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Depdc1aQ8CIG0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Depdc1aQ8CIG0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Depdc1aQ8CIG0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Depdc1aQ8CIG0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Depdc1aQ8CIG0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Depdc1aQ8CIG0 Gm13148-201ENSMUST00000118892 745 ntBASIC21.65■■□□□ 1.06
Depdc1aQ8CIG0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Depdc1aQ8CIG0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Depdc1aQ8CIG0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Depdc1aQ8CIG0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Depdc1aQ8CIG0 Gm6365-201ENSMUST00000054711 744 ntBASIC21.65■■□□□ 1.06
Depdc1aQ8CIG0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Depdc1aQ8CIG0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
Depdc1aQ8CIG0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Depdc1aQ8CIG0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Depdc1aQ8CIG0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Depdc1aQ8CIG0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Depdc1aQ8CIG0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Depdc1aQ8CIG0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.64■■□□□ 1.05
Depdc1aQ8CIG0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.64■■□□□ 1.05
Depdc1aQ8CIG0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.64■■□□□ 1.05
Depdc1aQ8CIG0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Depdc1aQ8CIG0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Depdc1aQ8CIG0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Depdc1aQ8CIG0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Depdc1aQ8CIG0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Gm7290-201ENSMUST00000104990 617 ntBASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Gm12918-201ENSMUST00000120234 636 ntBASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Gm15710-201ENSMUST00000121821 636 ntBASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Gm5075-201ENSMUST00000196916 622 ntBASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Depdc1aQ8CIG0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Depdc1aQ8CIG0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1aQ8CIG0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1aQ8CIG0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Depdc1aQ8CIG0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1aQ8CIG0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Depdc1aQ8CIG0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1aQ8CIG0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1aQ8CIG0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Depdc1aQ8CIG0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Depdc1aQ8CIG0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Depdc1aQ8CIG0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Depdc1aQ8CIG0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms