Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CopaQ8CIE6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopaQ8CIE6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopaQ8CIE6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.44■□□□□ 0.7
CopaQ8CIE6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.44■□□□□ 0.7
CopaQ8CIE6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopaQ8CIE6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopaQ8CIE6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CopaQ8CIE6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Gm29257-201ENSMUST00000186115 639 ntBASIC19.43■□□□□ 0.7
CopaQ8CIE6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CopaQ8CIE6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CopaQ8CIE6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CopaQ8CIE6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopaQ8CIE6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopaQ8CIE6 Gm27405-201ENSMUST00000184201 112 ntBASIC19.42■□□□□ 0.7
CopaQ8CIE6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CopaQ8CIE6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopaQ8CIE6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopaQ8CIE6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CopaQ8CIE6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CopaQ8CIE6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopaQ8CIE6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.41■□□□□ 0.7
CopaQ8CIE6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CopaQ8CIE6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CopaQ8CIE6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CopaQ8CIE6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CopaQ8CIE6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CopaQ8CIE6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.4■□□□□ 0.7
CopaQ8CIE6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CopaQ8CIE6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CopaQ8CIE6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CopaQ8CIE6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CopaQ8CIE6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CopaQ8CIE6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CopaQ8CIE6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CopaQ8CIE6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.38■□□□□ 0.69
CopaQ8CIE6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CopaQ8CIE6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CopaQ8CIE6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CopaQ8CIE6 Gm10033-202ENSMUST00000211874 928 ntBASIC19.38■□□□□ 0.69
CopaQ8CIE6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CopaQ8CIE6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CopaQ8CIE6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CopaQ8CIE6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CopaQ8CIE6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CopaQ8CIE6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CopaQ8CIE6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CopaQ8CIE6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms