Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim5Q8CI51 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim5Q8CI51 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Pdlim5Q8CI51 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim5Q8CI51 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim5Q8CI51 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim5Q8CI51 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.58■□□□□ 0.4
Pdlim5Q8CI51 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.58■□□□□ 0.4
Pdlim5Q8CI51 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.58■□□□□ 0.4
Pdlim5Q8CI51 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pdlim5Q8CI51 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim5Q8CI51 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim5Q8CI51 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pdlim5Q8CI51 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim5Q8CI51 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim5Q8CI51 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim5Q8CI51 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.58■□□□□ 0.4
Pdlim5Q8CI51 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.57■□□□□ 0.4
Pdlim5Q8CI51 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim5Q8CI51 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pdlim5Q8CI51 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim5Q8CI51 BC021767-201ENSMUST00000126387 1716 ntBASIC17.56■□□□□ 0.4
Pdlim5Q8CI51 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.56■□□□□ 0.4
Pdlim5Q8CI51 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim5Q8CI51 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim5Q8CI51 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim5Q8CI51 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.56■□□□□ 0.4
Pdlim5Q8CI51 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim5Q8CI51 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim5Q8CI51 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim5Q8CI51 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Gm12251-201ENSMUST00000117893 792 ntBASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim5Q8CI51 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim5Q8CI51 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.52■□□□□ 0.4
Pdlim5Q8CI51 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim5Q8CI51 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim5Q8CI51 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.52■□□□□ 0.4
Pdlim5Q8CI51 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim5Q8CI51 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Pdlim5Q8CI51 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.52■□□□□ 0.39
Pdlim5Q8CI51 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim5Q8CI51 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim5Q8CI51 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pdlim5Q8CI51 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Pdlim5Q8CI51 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms