Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vcpip1Q8CDG3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vcpip1Q8CDG3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vcpip1Q8CDG3 BC021767-201ENSMUST00000126387 1716 ntBASIC20.52■□□□□ 0.88
Vcpip1Q8CDG3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vcpip1Q8CDG3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vcpip1Q8CDG3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.52■□□□□ 0.87
Vcpip1Q8CDG3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Vcpip1Q8CDG3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vcpip1Q8CDG3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcpip1Q8CDG3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Vcpip1Q8CDG3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcpip1Q8CDG3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcpip1Q8CDG3 Spcs1-204ENSMUST00000226782 949 ntBASIC20.49■□□□□ 0.87
Vcpip1Q8CDG3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcpip1Q8CDG3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcpip1Q8CDG3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vcpip1Q8CDG3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcpip1Q8CDG3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcpip1Q8CDG3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcpip1Q8CDG3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcpip1Q8CDG3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vcpip1Q8CDG3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.48■□□□□ 0.87
Vcpip1Q8CDG3 Gm43137-201ENSMUST00000198052 594 ntBASIC20.48■□□□□ 0.87
Vcpip1Q8CDG3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.48■□□□□ 0.87
Vcpip1Q8CDG3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Vcpip1Q8CDG3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vcpip1Q8CDG3 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.48■□□□□ 0.87
Vcpip1Q8CDG3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vcpip1Q8CDG3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vcpip1Q8CDG3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vcpip1Q8CDG3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vcpip1Q8CDG3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vcpip1Q8CDG3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vcpip1Q8CDG3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.46■□□□□ 0.87
Vcpip1Q8CDG3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vcpip1Q8CDG3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vcpip1Q8CDG3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vcpip1Q8CDG3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Vcpip1Q8CDG3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Vcpip1Q8CDG3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Gm8495-201ENSMUST00000188740 694 ntBASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vcpip1Q8CDG3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vcpip1Q8CDG3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.44■□□□□ 0.86
Vcpip1Q8CDG3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Vcpip1Q8CDG3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vcpip1Q8CDG3 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms