Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc46a2Q8CA03 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc46a2Q8CA03 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc46a2Q8CA03 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc46a2Q8CA03 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc46a2Q8CA03 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc46a2Q8CA03 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc46a2Q8CA03 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc46a2Q8CA03 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc46a2Q8CA03 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc46a2Q8CA03 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc46a2Q8CA03 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Slc46a2Q8CA03 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc46a2Q8CA03 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.35■□□□□ 0.53
Slc46a2Q8CA03 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc46a2Q8CA03 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc46a2Q8CA03 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc46a2Q8CA03 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc46a2Q8CA03 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc46a2Q8CA03 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc46a2Q8CA03 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc46a2Q8CA03 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.33■□□□□ 0.53
Slc46a2Q8CA03 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.33■□□□□ 0.53
Slc46a2Q8CA03 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc46a2Q8CA03 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Slc46a2Q8CA03 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc46a2Q8CA03 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a2Q8CA03 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Slc46a2Q8CA03 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a2Q8CA03 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Slc46a2Q8CA03 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a2Q8CA03 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a2Q8CA03 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a2Q8CA03 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a2Q8CA03 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a2Q8CA03 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a2Q8CA03 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc46a2Q8CA03 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a2Q8CA03 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a2Q8CA03 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slc46a2Q8CA03 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a2Q8CA03 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a2Q8CA03 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Slc46a2Q8CA03 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a2Q8CA03 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a2Q8CA03 Gm45102-201ENSMUST00000207427 857 ntBASIC18.32■□□□□ 0.52
Slc46a2Q8CA03 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a2Q8CA03 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc46a2Q8CA03 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Gm14117-201ENSMUST00000122417 843 ntBASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.31■□□□□ 0.52
Slc46a2Q8CA03 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc46a2Q8CA03 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.29■□□□□ 0.52
Slc46a2Q8CA03 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc46a2Q8CA03 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Slc46a2Q8CA03 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc46a2Q8CA03 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slc46a2Q8CA03 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc46a2Q8CA03 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc46a2Q8CA03 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc46a2Q8CA03 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms