Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Ptcd1Q8C2E4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ptcd1Q8C2E4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptcd1Q8C2E4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ptcd1Q8C2E4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ptcd1Q8C2E4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptcd1Q8C2E4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Ptcd1Q8C2E4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptcd1Q8C2E4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ptcd1Q8C2E4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ptcd1Q8C2E4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptcd1Q8C2E4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptcd1Q8C2E4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ptcd1Q8C2E4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ptcd1Q8C2E4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptcd1Q8C2E4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptcd1Q8C2E4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ptcd1Q8C2E4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Ptcd1Q8C2E4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Ptcd1Q8C2E4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptcd1Q8C2E4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptcd1Q8C2E4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ptcd1Q8C2E4 Gm13836-201ENSMUST00000121159 501 ntBASIC23.59■■□□□ 1.37
Ptcd1Q8C2E4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ptcd1Q8C2E4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ptcd1Q8C2E4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Ptcd1Q8C2E4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptcd1Q8C2E4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptcd1Q8C2E4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptcd1Q8C2E4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ptcd1Q8C2E4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Ptcd1Q8C2E4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ptcd1Q8C2E4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ptcd1Q8C2E4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC23.58■■□□□ 1.37
Ptcd1Q8C2E4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ptcd1Q8C2E4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ptcd1Q8C2E4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
Ptcd1Q8C2E4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptcd1Q8C2E4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ptcd1Q8C2E4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptcd1Q8C2E4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC23.57■■□□□ 1.36
Ptcd1Q8C2E4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ptcd1Q8C2E4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ptcd1Q8C2E4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ptcd1Q8C2E4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptcd1Q8C2E4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptcd1Q8C2E4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ptcd1Q8C2E4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptcd1Q8C2E4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ptcd1Q8C2E4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ptcd1Q8C2E4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ptcd1Q8C2E4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptcd1Q8C2E4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Ptcd1Q8C2E4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptcd1Q8C2E4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.53■■□□□ 1.36
Ptcd1Q8C2E4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Ptcd1Q8C2E4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ptcd1Q8C2E4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms