Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ska3Q8C263 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ska3Q8C263 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ska3Q8C263 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.94■□□□□ 0.46
Ska3Q8C263 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ska3Q8C263 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ska3Q8C263 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ska3Q8C263 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ska3Q8C263 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ska3Q8C263 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ska3Q8C263 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ska3Q8C263 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.93■□□□□ 0.46
Ska3Q8C263 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska3Q8C263 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ska3Q8C263 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ska3Q8C263 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Ska3Q8C263 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.93■□□□□ 0.46
Ska3Q8C263 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska3Q8C263 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska3Q8C263 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska3Q8C263 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska3Q8C263 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ska3Q8C263 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ska3Q8C263 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska3Q8C263 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Ska3Q8C263 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ska3Q8C263 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ska3Q8C263 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska3Q8C263 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ska3Q8C263 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska3Q8C263 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska3Q8C263 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska3Q8C263 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ska3Q8C263 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska3Q8C263 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ska3Q8C263 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska3Q8C263 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska3Q8C263 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ska3Q8C263 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska3Q8C263 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska3Q8C263 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ska3Q8C263 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.91■□□□□ 0.46
Ska3Q8C263 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ska3Q8C263 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.91■□□□□ 0.46
Ska3Q8C263 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska3Q8C263 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ska3Q8C263 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska3Q8C263 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska3Q8C263 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska3Q8C263 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ska3Q8C263 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ska3Q8C263 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Ska3Q8C263 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ska3Q8C263 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ska3Q8C263 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.9■□□□□ 0.46
Ska3Q8C263 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ska3Q8C263 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ska3Q8C263 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.9■□□□□ 0.46
Ska3Q8C263 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.9■□□□□ 0.46
Ska3Q8C263 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.9■□□□□ 0.46
Ska3Q8C263 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ska3Q8C263 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.9■□□□□ 0.46
Ska3Q8C263 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.9■□□□□ 0.46
Ska3Q8C263 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ska3Q8C263 Gm10493-201ENSMUST00000097270 612 ntBASIC17.9■□□□□ 0.46
Ska3Q8C263 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ska3Q8C263 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ska3Q8C263 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ska3Q8C263 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.9■□□□□ 0.46
Ska3Q8C263 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ska3Q8C263 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.9■□□□□ 0.46
Ska3Q8C263 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ska3Q8C263 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ska3Q8C263 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ska3Q8C263 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ska3Q8C263 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ska3Q8C263 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.89■□□□□ 0.45
Ska3Q8C263 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.89■□□□□ 0.45
Ska3Q8C263 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ska3Q8C263 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ska3Q8C263 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ska3Q8C263 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ska3Q8C263 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Ska3Q8C263 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ska3Q8C263 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.88■□□□□ 0.45
Ska3Q8C263 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ska3Q8C263 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ska3Q8C263 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ska3Q8C263 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ska3Q8C263 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ska3Q8C263 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ska3Q8C263 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ska3Q8C263 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ska3Q8C263 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ska3Q8C263 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.87■□□□□ 0.45
Ska3Q8C263 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ska3Q8C263 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ska3Q8C263 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.87■□□□□ 0.45
Ska3Q8C263 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ska3Q8C263 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms