Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
Vps9d1Q8C190 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps9d1Q8C190 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.84■□□□□ 0.45
Vps9d1Q8C190 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.84■□□□□ 0.45
Vps9d1Q8C190 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.84■□□□□ 0.45
Vps9d1Q8C190 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps9d1Q8C190 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps9d1Q8C190 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps9d1Q8C190 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
Vps9d1Q8C190 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps9d1Q8C190 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Vps9d1Q8C190 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps9d1Q8C190 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Vps9d1Q8C190 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps9d1Q8C190 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Vps9d1Q8C190 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.83■□□□□ 0.45
Vps9d1Q8C190 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.83■□□□□ 0.45
Vps9d1Q8C190 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps9d1Q8C190 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps9d1Q8C190 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps9d1Q8C190 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps9d1Q8C190 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.83■□□□□ 0.44
Vps9d1Q8C190 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps9d1Q8C190 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.83■□□□□ 0.44
Vps9d1Q8C190 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps9d1Q8C190 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Vps9d1Q8C190 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Golgb1-201ENSMUST00000023534 498 ntBASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.82■□□□□ 0.44
Vps9d1Q8C190 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Vps9d1Q8C190 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps9d1Q8C190 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Vps9d1Q8C190 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps9d1Q8C190 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps9d1Q8C190 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps9d1Q8C190 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Vps9d1Q8C190 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps9d1Q8C190 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps9d1Q8C190 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Vps9d1Q8C190 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps9d1Q8C190 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps9d1Q8C190 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps9d1Q8C190 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps9d1Q8C190 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps9d1Q8C190 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps9d1Q8C190 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vps9d1Q8C190 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms