Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Suds3Q8BR65 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Suds3Q8BR65 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Suds3Q8BR65 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Suds3Q8BR65 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Suds3Q8BR65 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Suds3Q8BR65 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Suds3Q8BR65 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Suds3Q8BR65 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Suds3Q8BR65 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Suds3Q8BR65 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.52■□□□□ 0.72
Suds3Q8BR65 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.52■□□□□ 0.72
Suds3Q8BR65 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Suds3Q8BR65 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.52■□□□□ 0.72
Suds3Q8BR65 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.52■□□□□ 0.72
Suds3Q8BR65 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Suds3Q8BR65 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Suds3Q8BR65 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.52■□□□□ 0.72
Suds3Q8BR65 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Suds3Q8BR65 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Suds3Q8BR65 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Suds3Q8BR65 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
Suds3Q8BR65 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Suds3Q8BR65 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.51■□□□□ 0.71
Suds3Q8BR65 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Suds3Q8BR65 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
Suds3Q8BR65 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Suds3Q8BR65 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Suds3Q8BR65 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Suds3Q8BR65 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.5■□□□□ 0.71
Suds3Q8BR65 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Suds3Q8BR65 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Suds3Q8BR65 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Suds3Q8BR65 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.5■□□□□ 0.71
Suds3Q8BR65 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.5■□□□□ 0.71
Suds3Q8BR65 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Suds3Q8BR65 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Suds3Q8BR65 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Suds3Q8BR65 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Suds3Q8BR65 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Suds3Q8BR65 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Suds3Q8BR65 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Suds3Q8BR65 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Suds3Q8BR65 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Gm26833-201ENSMUST00000180899 440 ntBASIC19.48■□□□□ 0.71
Suds3Q8BR65 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Suds3Q8BR65 AA386476-201ENSMUST00000098781 1665 ntBASIC19.48■□□□□ 0.71
Suds3Q8BR65 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Suds3Q8BR65 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Suds3Q8BR65 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.47■□□□□ 0.71
Suds3Q8BR65 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Suds3Q8BR65 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Suds3Q8BR65 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Suds3Q8BR65 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.47■□□□□ 0.71
Suds3Q8BR65 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Suds3Q8BR65 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Suds3Q8BR65 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.47■□□□□ 0.71
Suds3Q8BR65 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.47■□□□□ 0.71
Suds3Q8BR65 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Suds3Q8BR65 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Suds3Q8BR65 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Suds3Q8BR65 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Suds3Q8BR65 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Suds3Q8BR65 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Suds3Q8BR65 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
Suds3Q8BR65 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Suds3Q8BR65 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Suds3Q8BR65 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Suds3Q8BR65 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Suds3Q8BR65 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Suds3Q8BR65 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Suds3Q8BR65 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Suds3Q8BR65 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Suds3Q8BR65 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms