Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cdkl3Q8BLF2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl3Q8BLF2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdkl3Q8BLF2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdkl3Q8BLF2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdkl3Q8BLF2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Gm12366-201ENSMUST00000121722 873 ntBASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Gm5786-201ENSMUST00000085368 882 ntBASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cdkl3Q8BLF2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cdkl3Q8BLF2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cdkl3Q8BLF2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdkl3Q8BLF2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms