Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 Trmt13-210ENSMUST00000198454 880 ntBASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Tdp1Q8BJ37 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tdp1Q8BJ37 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tdp1Q8BJ37 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.2■□□□□ 0.98
Tdp1Q8BJ37 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Tdp1Q8BJ37 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.2■□□□□ 0.98
Tdp1Q8BJ37 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tdp1Q8BJ37 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tdp1Q8BJ37 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Tdp1Q8BJ37 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tdp1Q8BJ37 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tdp1Q8BJ37 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Tdp1Q8BJ37 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.18■□□□□ 0.98
Tdp1Q8BJ37 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.18■□□□□ 0.98
Tdp1Q8BJ37 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.18■□□□□ 0.98
Tdp1Q8BJ37 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.18■□□□□ 0.98
Tdp1Q8BJ37 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tdp1Q8BJ37 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tdp1Q8BJ37 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tdp1Q8BJ37 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.18■□□□□ 0.98
Tdp1Q8BJ37 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Tdp1Q8BJ37 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tdp1Q8BJ37 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tdp1Q8BJ37 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.17■□□□□ 0.98
Tdp1Q8BJ37 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Tdp1Q8BJ37 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Tdp1Q8BJ37 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tdp1Q8BJ37 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tdp1Q8BJ37 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tdp1Q8BJ37 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tdp1Q8BJ37 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tdp1Q8BJ37 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Tdp1Q8BJ37 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tdp1Q8BJ37 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tdp1Q8BJ37 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tdp1Q8BJ37 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tdp1Q8BJ37 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Tdp1Q8BJ37 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tdp1Q8BJ37 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tdp1Q8BJ37 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tdp1Q8BJ37 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tdp1Q8BJ37 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.15■□□□□ 0.98
Tdp1Q8BJ37 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tdp1Q8BJ37 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tdp1Q8BJ37 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.15■□□□□ 0.98
Tdp1Q8BJ37 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tdp1Q8BJ37 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.15■□□□□ 0.98
Tdp1Q8BJ37 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Tdp1Q8BJ37 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tdp1Q8BJ37 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Tdp1Q8BJ37 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tdp1Q8BJ37 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tdp1Q8BJ37 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Tdp1Q8BJ37 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.14■□□□□ 0.97
Tdp1Q8BJ37 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tdp1Q8BJ37 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tdp1Q8BJ37 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tdp1Q8BJ37 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tdp1Q8BJ37 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.13■□□□□ 0.97
Tdp1Q8BJ37 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tdp1Q8BJ37 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tdp1Q8BJ37 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Tdp1Q8BJ37 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tdp1Q8BJ37 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tdp1Q8BJ37 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tdp1Q8BJ37 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tdp1Q8BJ37 Gm27275-201ENSMUST00000184318 272 ntBASIC21.12■□□□□ 0.97
Tdp1Q8BJ37 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tdp1Q8BJ37 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tdp1Q8BJ37 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Tdp1Q8BJ37 Gm10812-201ENSMUST00000099864 546 ntBASIC21.12■□□□□ 0.97
Tdp1Q8BJ37 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.12■□□□□ 0.97
Tdp1Q8BJ37 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tdp1Q8BJ37 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tdp1Q8BJ37 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Tdp1Q8BJ37 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tdp1Q8BJ37 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms