Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh20Q8BIZ0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh20Q8BIZ0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Pcdh20Q8BIZ0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh20Q8BIZ0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh20Q8BIZ0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Pcdh20Q8BIZ0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh20Q8BIZ0 Gm43017-201ENSMUST00000198296 752 ntBASIC18.58■□□□□ 0.56
Pcdh20Q8BIZ0 Gm43173-201ENSMUST00000202246 593 ntBASIC18.58■□□□□ 0.56
Pcdh20Q8BIZ0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.58■□□□□ 0.56
Pcdh20Q8BIZ0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Pcdh20Q8BIZ0 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.58■□□□□ 0.56
Pcdh20Q8BIZ0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh20Q8BIZ0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh20Q8BIZ0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh20Q8BIZ0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh20Q8BIZ0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh20Q8BIZ0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh20Q8BIZ0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh20Q8BIZ0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh20Q8BIZ0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh20Q8BIZ0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh20Q8BIZ0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh20Q8BIZ0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh20Q8BIZ0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdh20Q8BIZ0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdh20Q8BIZ0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh20Q8BIZ0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh20Q8BIZ0 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.54■□□□□ 0.56
Pcdh20Q8BIZ0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh20Q8BIZ0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh20Q8BIZ0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.54■□□□□ 0.56
Pcdh20Q8BIZ0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh20Q8BIZ0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh20Q8BIZ0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh20Q8BIZ0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh20Q8BIZ0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh20Q8BIZ0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pcdh20Q8BIZ0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh20Q8BIZ0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh20Q8BIZ0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh20Q8BIZ0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh20Q8BIZ0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh20Q8BIZ0 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.52■□□□□ 0.55
Pcdh20Q8BIZ0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh20Q8BIZ0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh20Q8BIZ0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms