Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc116Q80X53 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc116Q80X53 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc116Q80X53 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.74■□□□□ 0.59
Ccdc116Q80X53 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc116Q80X53 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc116Q80X53 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc116Q80X53 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc116Q80X53 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc116Q80X53 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc116Q80X53 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc116Q80X53 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc116Q80X53 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc116Q80X53 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc116Q80X53 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc116Q80X53 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc116Q80X53 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc116Q80X53 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc116Q80X53 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc116Q80X53 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc116Q80X53 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc116Q80X53 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccdc116Q80X53 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc116Q80X53 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc116Q80X53 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc116Q80X53 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc116Q80X53 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc116Q80X53 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Gm12821-201ENSMUST00000120022 600 ntBASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Gm8493-201ENSMUST00000196881 489 ntBASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Gm45417-201ENSMUST00000209533 758 ntBASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc116Q80X53 BC021767-201ENSMUST00000126387 1716 ntBASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc116Q80X53 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Ccdc116Q80X53 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Gm6139-201ENSMUST00000079261 882 ntBASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc116Q80X53 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc116Q80X53 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc116Q80X53 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc116Q80X53 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.69■□□□□ 0.58
Ccdc116Q80X53 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ccdc116Q80X53 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ccdc116Q80X53 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Ccdc116Q80X53 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc116Q80X53 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc116Q80X53 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc116Q80X53 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc116Q80X53 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc116Q80X53 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc116Q80X53 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ccdc116Q80X53 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms