Protein–RNA interactions for Protein: Q80UJ7

Rab3gap1, Rab3 GTPase-activating protein catalytic subunit, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3gap1Q80UJ7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rab3gap1Q80UJ7 Golph3-202ENSMUST00000226517 2359 ntBASIC23.32■■□□□ 1.32
Rab3gap1Q80UJ7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.32■■□□□ 1.32
Rab3gap1Q80UJ7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rab3gap1Q80UJ7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC23.32■■□□□ 1.32
Rab3gap1Q80UJ7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Rab3gap1Q80UJ7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
Rab3gap1Q80UJ7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rab3gap1Q80UJ7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rab3gap1Q80UJ7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rab3gap1Q80UJ7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rab3gap1Q80UJ7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rab3gap1Q80UJ7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rab3gap1Q80UJ7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rab3gap1Q80UJ7 Gm32699-201ENSMUST00000221728 1988 ntBASIC23.31■■□□□ 1.32
Rab3gap1Q80UJ7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rab3gap1Q80UJ7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rab3gap1Q80UJ7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.3■■□□□ 1.32
Rab3gap1Q80UJ7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rab3gap1Q80UJ7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rab3gap1Q80UJ7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Rab3gap1Q80UJ7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rab3gap1Q80UJ7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rab3gap1Q80UJ7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rab3gap1Q80UJ7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.29■■□□□ 1.32
Rab3gap1Q80UJ7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Rab3gap1Q80UJ7 Mir5133-201ENSMUST00000174955 77 ntBASIC23.29■■□□□ 1.32
Rab3gap1Q80UJ7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
Rab3gap1Q80UJ7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Rab3gap1Q80UJ7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rab3gap1Q80UJ7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rab3gap1Q80UJ7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.29■■□□□ 1.32
Rab3gap1Q80UJ7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab3gap1Q80UJ7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rab3gap1Q80UJ7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.27■■□□□ 1.31
Rab3gap1Q80UJ7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Rab3gap1Q80UJ7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Rab3gap1Q80UJ7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rab3gap1Q80UJ7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rab3gap1Q80UJ7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.26■■□□□ 1.31
Rab3gap1Q80UJ7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rab3gap1Q80UJ7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rab3gap1Q80UJ7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rab3gap1Q80UJ7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rab3gap1Q80UJ7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rab3gap1Q80UJ7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rab3gap1Q80UJ7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rab3gap1Q80UJ7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.25■■□□□ 1.31
Rab3gap1Q80UJ7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.25■■□□□ 1.31
Rab3gap1Q80UJ7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.25■■□□□ 1.31
Rab3gap1Q80UJ7 Gm6365-201ENSMUST00000054711 744 ntBASIC23.25■■□□□ 1.31
Rab3gap1Q80UJ7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rab3gap1Q80UJ7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Rab3gap1Q80UJ7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rab3gap1Q80UJ7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab3gap1Q80UJ7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab3gap1Q80UJ7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab3gap1Q80UJ7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab3gap1Q80UJ7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Rab3gap1Q80UJ7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab3gap1Q80UJ7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rab3gap1Q80UJ7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab3gap1Q80UJ7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab3gap1Q80UJ7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab3gap1Q80UJ7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rab3gap1Q80UJ7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rab3gap1Q80UJ7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rab3gap1Q80UJ7 Gm13148-201ENSMUST00000118892 745 ntBASIC23.23■■□□□ 1.31
Rab3gap1Q80UJ7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab3gap1Q80UJ7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab3gap1Q80UJ7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Rab3gap1Q80UJ7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rab3gap1Q80UJ7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms