Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp8Q80U87 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp8Q80U87 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp8Q80U87 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Usp8Q80U87 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp8Q80U87 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp8Q80U87 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp8Q80U87 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Usp8Q80U87 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.06■□□□□ 0.64
Usp8Q80U87 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp8Q80U87 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp8Q80U87 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp8Q80U87 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp8Q80U87 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.06■□□□□ 0.64
Usp8Q80U87 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Usp8Q80U87 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp8Q80U87 Golph3-205ENSMUST00000228671 2842 ntBASIC19.06■□□□□ 0.64
Usp8Q80U87 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.05■□□□□ 0.64
Usp8Q80U87 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp8Q80U87 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp8Q80U87 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp8Q80U87 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp8Q80U87 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp8Q80U87 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp8Q80U87 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Usp8Q80U87 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp8Q80U87 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp8Q80U87 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp8Q80U87 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp8Q80U87 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Usp8Q80U87 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp8Q80U87 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp8Q80U87 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Usp8Q80U87 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Usp8Q80U87 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.04■□□□□ 0.64
Usp8Q80U87 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Usp8Q80U87 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp8Q80U87 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Usp8Q80U87 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp8Q80U87 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp8Q80U87 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Usp8Q80U87 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp8Q80U87 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp8Q80U87 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Usp8Q80U87 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp8Q80U87 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Usp8Q80U87 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp8Q80U87 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp8Q80U87 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.03■□□□□ 0.64
Usp8Q80U87 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp8Q80U87 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp8Q80U87 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp8Q80U87 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp8Q80U87 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Usp8Q80U87 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp8Q80U87 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp8Q80U87 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp8Q80U87 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp8Q80U87 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp8Q80U87 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp8Q80U87 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp8Q80U87 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp8Q80U87 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp8Q80U87 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp8Q80U87 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp8Q80U87 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp8Q80U87 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Usp8Q80U87 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp8Q80U87 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp8Q80U87 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp8Q80U87 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp8Q80U87 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp8Q80U87 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp8Q80U87 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp8Q80U87 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp8Q80U87 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp8Q80U87 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19■□□□□ 0.63
Usp8Q80U87 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19■□□□□ 0.63
Usp8Q80U87 AC154266.1-201ENSMUST00000223190 503 ntBASIC19■□□□□ 0.63
Usp8Q80U87 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19■□□□□ 0.63
Usp8Q80U87 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Usp8Q80U87 Gm13241-201ENSMUST00000094493 780 ntBASIC19■□□□□ 0.63
Usp8Q80U87 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Usp8Q80U87 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp8Q80U87 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Usp8Q80U87 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp8Q80U87 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp8Q80U87 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp8Q80U87 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms