Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh8Q7TSK3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh8Q7TSK3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.86■□□□□ 0.61
Pcdh8Q7TSK3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh8Q7TSK3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh8Q7TSK3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Pcdh8Q7TSK3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdh8Q7TSK3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh8Q7TSK3 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.86■□□□□ 0.61
Pcdh8Q7TSK3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh8Q7TSK3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh8Q7TSK3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh8Q7TSK3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh8Q7TSK3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.85■□□□□ 0.61
Pcdh8Q7TSK3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdh8Q7TSK3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdh8Q7TSK3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdh8Q7TSK3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pcdh8Q7TSK3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh8Q7TSK3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 Gm12933-201ENSMUST00000120203 872 ntBASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh8Q7TSK3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Pcdh8Q7TSK3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.83■□□□□ 0.61
Pcdh8Q7TSK3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh8Q7TSK3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh8Q7TSK3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh8Q7TSK3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdh8Q7TSK3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.83■□□□□ 0.6
Pcdh8Q7TSK3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdh8Q7TSK3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh8Q7TSK3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdh8Q7TSK3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh8Q7TSK3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh8Q7TSK3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pcdh8Q7TSK3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh8Q7TSK3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh8Q7TSK3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh8Q7TSK3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh8Q7TSK3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh8Q7TSK3 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.82■□□□□ 0.6
Pcdh8Q7TSK3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Pcdh8Q7TSK3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdh8Q7TSK3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh8Q7TSK3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh8Q7TSK3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh8Q7TSK3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh8Q7TSK3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh8Q7TSK3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh8Q7TSK3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh8Q7TSK3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh8Q7TSK3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh8Q7TSK3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh8Q7TSK3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Pcdh8Q7TSK3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdh8Q7TSK3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh8Q7TSK3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdh8Q7TSK3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Pcdh8Q7TSK3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh8Q7TSK3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms