Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Otub1Q7TQI3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Otub1Q7TQI3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otub1Q7TQI3 AA386476-201ENSMUST00000098781 1665 ntBASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.15■□□□□ 0.5
Otub1Q7TQI3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Gm13241-201ENSMUST00000094493 780 ntBASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Otub1Q7TQI3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Otub1Q7TQI3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Otub1Q7TQI3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otub1Q7TQI3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.13■□□□□ 0.49
Otub1Q7TQI3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Otub1Q7TQI3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.13■□□□□ 0.49
Otub1Q7TQI3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Otub1Q7TQI3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Otub1Q7TQI3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otub1Q7TQI3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Otub1Q7TQI3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.11■□□□□ 0.49
Otub1Q7TQI3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Otub1Q7TQI3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Otub1Q7TQI3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otub1Q7TQI3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otub1Q7TQI3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Otub1Q7TQI3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otub1Q7TQI3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otub1Q7TQI3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Gm12251-201ENSMUST00000117893 792 ntBASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Otub1Q7TQI3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Otub1Q7TQI3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Otub1Q7TQI3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Otub1Q7TQI3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.09■□□□□ 0.49
Otub1Q7TQI3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Otub1Q7TQI3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Otub1Q7TQI3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Otub1Q7TQI3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Otub1Q7TQI3 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.09■□□□□ 0.49
Otub1Q7TQI3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Otub1Q7TQI3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Otub1Q7TQI3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Otub1Q7TQI3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Otub1Q7TQI3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.49
Otub1Q7TQI3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Otub1Q7TQI3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Otub1Q7TQI3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Otub1Q7TQI3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms